Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AtXTH13; XTH13
Type: Protein GRN ID: np38893 Name: AtXTH13; XTH13
Annotation: XTH13, AtXTH13 | xyloglucan endotransglucosylase/hydrolase 13
Gene Locus: AT5G57540
Gene Expression (Affy ATH1 probeset): 247914_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.04704) with  --  RHS18
3 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10694) with  --  AtXTH12; XTH12
4 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19
5 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.04704) with  --  RHS18  --  has similar expression pattern (mutual information value=0.877866) with  --  FLA6
6 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.04704) with  --  RHS18  --  has similar expression pattern (mutual information value=0.926911) with  --  AT4G25790
7 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.04704) with  --  RHS18  --  has similar expression pattern (mutual information value=0.908725) with  --  AT4G33730
8 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.04704) with  --  RHS18  --  has similar expression pattern (mutual information value=1.16305) with  --  AGP3
9 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.04704) with  --  RHS18  --  has similar expression pattern (mutual information value=0.914396) with  --  AT5G05500
10 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.04704) with  --  RHS18  --  has similar expression pattern (mutual information value=0.999512) with  --  AT5G35190
11 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10694) with  --  AtXTH12; XTH12  --  has similar expression pattern (mutual information value=1.00212) with  --  AT1G34510
12 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10694) with  --  AtXTH12; XTH12  --  has similar expression pattern (mutual information value=1.04334) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18
13 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10694) with  --  AtXTH12; XTH12  --  has similar expression pattern (mutual information value=0.876797) with  --  AT4G30320
14 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10694) with  --  AtXTH12; XTH12  --  has similar expression pattern (mutual information value=1.08406) with  --  AT3G49960
15 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10694) with  --  AtXTH12; XTH12  --  has similar expression pattern (mutual information value=1.06308) with  --  AT5G04960
16 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.35948) with  --  AT1G30870
17 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.28767) with  --  AT1G05240
18 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.28767) with  --  AT1G05250
19 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.15468) with  --  ATEXP7; ATEXPA7; ATHEXP ALPHA 1.26; EXP7; EXPA7
20 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.44835) with  --  RHS13
21 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=0.899268) with  --  AT4G09990
22 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.31581) with  --  AT4G26010
23 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.03754) with  --  AT3G54580
24 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=1.03754) with  --  ATHRGP1; HRGP1
25 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=0.902146) with  --  COBL9; DER9; MRH4; SHV2
26 AtXTH13; XTH13  --  has similar expression pattern (mutual information value=1.10575) with  --  RHS19  --  has similar expression pattern (mutual information value=0.816033) with  --  LRL3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact