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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G13390
Type: Protein GRN ID: np33932 Name:
Annotation: Proline-rich extensin-like family protein
Gene Locus: AT4G13390
Gene Expression (Affy ATH1 probeset): 254772_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G13390  --  has similar expression pattern (mutual information value=0.892054) with  --  LRX1
3 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630
4 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT2G24980
5 AT4G13390  --  has similar expression pattern (mutual information value=0.965036) with  --  ATPRP1; PRP1; RHS7
6 AT4G13390  --  has similar expression pattern (mutual information value=0.973482) with  --  AT5G49080
7 AT4G13390  --  has similar expression pattern (mutual information value=0.973482) with  --  AT5G06640
8 AT4G13390  --  has similar expression pattern (mutual information value=0.973482) with  --  AT4G08400
9 AT4G13390  --  has similar expression pattern (mutual information value=0.973482) with  --  AT4G08410
10 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580
11 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  ATHRGP1; HRGP1
12 AT4G13390  --  has similar expression pattern (mutual information value=0.892054) with  --  LRX1  --  has similar expression pattern (mutual information value=0.801358) with  --  ATMLO15; MLO15
13 AT4G13390  --  has similar expression pattern (mutual information value=0.892054) with  --  LRX1  --  has similar expression pattern (mutual information value=1.14739) with  --  AT1G23720
14 AT4G13390  --  has similar expression pattern (mutual information value=0.892054) with  --  LRX1  --  has similar expression pattern (mutual information value=0.830533) with  --  RAP2.11
15 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.957766) with  --  AT1G05240
16 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.957766) with  --  AT1G05250
17 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.807251) with  --  FLA6
18 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.983524) with  --  AGP3
19 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=1.00561) with  --  ATPRP3; PRP3
20 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.900815) with  --  COBL9; DER9; MRH4; SHV2
21 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.848952) with  --  CYCP4; CYCP4;2
22 AT4G13390  --  has similar expression pattern (mutual information value=1.05254) with  --  AT5G06630  --  has similar expression pattern (mutual information value=1.14541) with  --  AT5G35190
23 AT4G13390  --  has similar expression pattern (mutual information value=0.965036) with  --  ATPRP1; PRP1; RHS7  --  has similar expression pattern (mutual information value=0.894165) with  --  AtGH9C1; GH9C1
24 AT4G13390  --  has similar expression pattern (mutual information value=0.965036) with  --  ATPRP1; PRP1; RHS7  --  has similar expression pattern (mutual information value=0.90207) with  --  AT3G49960
25 AT4G13390  --  has similar expression pattern (mutual information value=0.973482) with  --  AT5G49080  --  has similar expression pattern (mutual information value=0.800294) with  --  AT1G74460
26 AT4G13390  --  has similar expression pattern (mutual information value=0.973482) with  --  AT5G49080  --  has similar expression pattern (mutual information value=0.813306) with  --  AT5G37690
27 AT4G13390  --  has similar expression pattern (mutual information value=0.973482) with  --  AT5G49080  --  has similar expression pattern (mutual information value=1.08371) with  --  AT5G19800
28 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.838266) with  --  AT2G41970
29 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.925024) with  --  AT2G43150
30 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870
31 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18
32 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.979524) with  --  ATEXP7; ATEXPA7; ATHEXP ALPHA 1.26; EXP7; EXPA7
33 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.988407) with  --  RHS13
34 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.989588) with  --  ATXTH14; XTH14; XTR9
35 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.05155) with  --  AT4G26010
36 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.845497) with  --  AT3G28550
37 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7
38 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.03089) with  --  ATEXT3; EXT3; RSH
39 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.878052) with  --  AT3G07900
40 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3
41 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.02004) with  --  AT5G04960
42 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2
43 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.838708) with  --  LRL3
44 AT4G13390  --  has similar expression pattern (mutual information value=1.07929) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.03754) with  --  RHS19
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