Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G09990
Type: Protein GRN ID: np30952 Name:
Annotation: Protein of unknown function (DUF579)
Gene Locus: AT4G09990
Gene Expression (Affy ATH1 probeset): 255005_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G09990  --  has similar expression pattern (mutual information value=0.808405) with  --  AT2G45750
3 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1
4 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870
5 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18
6 AT4G09990  --  has similar expression pattern (mutual information value=0.854924) with  --  ATEXP7; ATEXPA7; ATHEXP ALPHA 1.26; EXP7; EXPA7
7 AT4G09990  --  has similar expression pattern (mutual information value=0.872514) with  --  RHS13
8 AT4G09990  --  has similar expression pattern (mutual information value=0.852252) with  --  AT5G04960
9 AT4G09990  --  has similar expression pattern (mutual information value=0.946376) with  --  AT5G05500
10 AT4G09990  --  has similar expression pattern (mutual information value=0.865021) with  --  COBL9; DER9; MRH4; SHV2
11 AT4G09990  --  has similar expression pattern (mutual information value=0.899268) with  --  RHS19
12 AT4G09990  --  has similar expression pattern (mutual information value=0.913947) with  --  AT2G47540
13 AT4G09990  --  has similar expression pattern (mutual information value=0.808405) with  --  AT2G45750  --  has similar expression pattern (mutual information value=0.8355) with  --  RHS12
14 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  interacts with  --  AGP27; ATAGP27
15 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=0.912065) with  --  ZIP3
16 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=0.958071) with  --  AT1G67330
17 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=0.804136) with  --  AT1G18980
18 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=1.01019) with  --  AT4G12520
19 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=1.01019) with  --  AT4G12510
20 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=0.933585) with  --  AT4G30170
21 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=0.829008) with  --  AT5G17820
22 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=1.03835) with  --  AT5G42510
23 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=1.03835) with  --  AT5G42500
24 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=1.06179) with  --  AT5G46890
25 AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1  --  has similar expression pattern (mutual information value=1.06179) with  --  AT5G46900
26 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.807873) with  --  AT1G14960
27 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=1.1286) with  --  AtGH9C1; GH9C1
28 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.87074) with  --  AHP1
29 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.826285) with  --  AT4G25090
30 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=1.28329) with  --  ATXTH14; XTH14; XTR9
31 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=1.39392) with  --  AT4G26010
32 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.952354) with  --  AT3G54580
33 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.952354) with  --  ATHRGP1; HRGP1
34 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.830712) with  --  AT5G50560
35 AT4G09990  --  has similar expression pattern (mutual information value=0.94232) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.830712) with  --  AT5G50660
36 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.968688) with  --  AT1G34510
37 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=1.00618) with  --  AT3G12540
38 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.858746) with  --  ATIRT2; IRT2
39 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.900023) with  --  AT4G22090
40 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.900023) with  --  RHS14
41 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.933219) with  --  AT4G30320
42 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.945529) with  --  AT5G24313
43 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=1.04334) with  --  AtXTH12; XTH12
44 AT4G09990  --  has similar expression pattern (mutual information value=0.920994) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.986386) with  --  AT5G35190
45 AT4G09990  --  has similar expression pattern (mutual information value=0.854924) with  --  ATEXP7; ATEXPA7; ATHEXP ALPHA 1.26; EXP7; EXPA7  --  has similar expression pattern (mutual information value=0.837287) with  --  AT2G41970
46 AT4G09990  --  has similar expression pattern (mutual information value=0.872514) with  --  RHS13  --  has similar expression pattern (mutual information value=1.25512) with  --  AT1G05240
47 AT4G09990  --  has similar expression pattern (mutual information value=0.872514) with  --  RHS13  --  has similar expression pattern (mutual information value=1.25512) with  --  AT1G05250
48 AT4G09990  --  has similar expression pattern (mutual information value=0.872514) with  --  RHS13  --  has similar expression pattern (mutual information value=0.81723) with  --  COW1; SRH1
49 AT4G09990  --  has similar expression pattern (mutual information value=0.872514) with  --  RHS13  --  has similar expression pattern (mutual information value=0.809261) with  --  LRL3
50 AT4G09990  --  has similar expression pattern (mutual information value=0.852252) with  --  AT5G04960  --  has similar expression pattern (mutual information value=0.870679) with  --  MRH6
51 AT4G09990  --  has similar expression pattern (mutual information value=0.852252) with  --  AT5G04960  --  has similar expression pattern (mutual information value=1.22775) with  --  AT3G49960
52 AT4G09990  --  has similar expression pattern (mutual information value=0.946376) with  --  AT5G05500  --  has similar expression pattern (mutual information value=0.803225) with  --  AT3G20370
53 AT4G09990  --  has similar expression pattern (mutual information value=0.946376) with  --  AT5G05500  --  has similar expression pattern (mutual information value=1.34553) with  --  ATPRP3; PRP3
54 AT4G09990  --  has similar expression pattern (mutual information value=0.946376) with  --  AT5G05500  --  has similar expression pattern (mutual information value=0.914396) with  --  RHS18
55 AT4G09990  --  has similar expression pattern (mutual information value=0.865021) with  --  COBL9; DER9; MRH4; SHV2  --  has similar expression pattern (mutual information value=0.900815) with  --  AT5G06630
56 AT4G09990  --  has similar expression pattern (mutual information value=0.865021) with  --  COBL9; DER9; MRH4; SHV2  --  has similar expression pattern (mutual information value=0.900815) with  --  AT2G24980
57 AT4G09990  --  has similar expression pattern (mutual information value=0.865021) with  --  COBL9; DER9; MRH4; SHV2  --  has similar expression pattern (mutual information value=0.840132) with  --  AT4G25790
58 AT4G09990  --  has similar expression pattern (mutual information value=0.899268) with  --  RHS19  --  has similar expression pattern (mutual information value=1.10575) with  --  AtXTH13; XTH13
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact