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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G53930
Type: Protein GRN ID: np30099 Name:
Annotation: Protein kinase superfamily protein [EC:2.7.11.1]
Gene Locus: AT3G53930
Gene Expression (Affy ATH1 probeset): 251914_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1
3 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11
4 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1
5 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3
6 AT3G53930  --  has similar expression pattern (mutual information value=0.968537) with  --  AT5G45190
7 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.863006) with  --  AT2G38410
8 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.934796) with  --  ARI5; ATARI5
9 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=1.12326) with  --  AT1G68140
10 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.857858) with  --  AT3G16940
11 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.822151) with  --  AT3G24740
12 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.834809) with  --  AT4G29380
13 AT3G53930  --  has similar expression pattern (mutual information value=0.834971) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.823061) with  --  SSP4
14 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  interacts with  --  AtLEC1; EMB 212; EMB212; LEC1; NF-YB9
15 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  interacts with  --  NF-YB2
16 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  interacts with  --  NF-YB3
17 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  interacts with  --  NF-YB7
18 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.04283) with  --  AT2G30530
19 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.80724) with  --  AT2G44200
20 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.995914) with  --  SMP1
21 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.868529) with  --  AT2G31670
22 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.874162) with  --  WRKY4
23 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.970427) with  --  MBD10
24 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.827401) with  --  AT1G21610
25 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.909542) with  --  AT2G01100
26 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.86782) with  --  AT1G70590
27 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.854792) with  --  AT1G13880
28 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.01837) with  --  OBE1
29 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.813346) with  --  BZIP28
30 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.968398) with  --  AT3G21810
31 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.80538) with  --  AT3G14075
32 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.871391) with  --  AT3G13410
33 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.27112) with  --  AT3G12140
34 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.825664) with  --  AT1G17790
35 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.27298) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B
36 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.03213) with  --  AT4G08580
37 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.03213) with  --  AT5G17900
38 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.883031) with  --  AT3G55600
39 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.968632) with  --  AT3G61800
40 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.821822) with  --  AT3G62080
41 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.0644) with  --  AT5G01350
42 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.943487) with  --  anac078; NAC2
43 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.952975) with  --  AT5G06780
44 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.869019) with  --  AT5G08230
45 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.869019) with  --  ath-miR834
46 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.03) with  --  AT5G08535
47 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.820348) with  --  ATSRL1
48 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.835881) with  --  RPL27
49 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.839752) with  --  AT5G43490
50 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.839752) with  --  AT5G48610
51 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.829682) with  --  AT5G63640
52 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.931846) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
53 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.02739) with  --  AT1G25988
54 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.02739) with  --  AT1G25682
55 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.803234) with  --  AT5G04240
56 AT3G53930  --  has similar expression pattern (mutual information value=0.877818) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.946975) with  --  FAR1
57 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  interacts with  --  TPR3
58 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  interacts with  --  TPR1
59 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.990684) with  --  CRF7
60 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.976623) with  --  AT2G22230
61 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.803725) with  --  AT1G34300
62 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.845037) with  --  AT1G26580
63 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.883305) with  --  AT3G09770
64 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.808806) with  --  AT3G17770
65 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.861522) with  --  AT4G33940
66 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.821114) with  --  SUA
67 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.833499) with  --  AT5G05100
68 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=0.810145) with  --  AT5G19430
69 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  has similar expression pattern (mutual information value=1.01774) with  --  SBP1
70 AT3G53930  --  has similar expression pattern (mutual information value=0.90661) with  --  ARI1; ATARI1  --  is the target gene of  --  ath-miR5023
71 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.81373) with  --  AT1G65020
72 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.805875) with  --  AT1G63490
73 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.966816) with  --  AT4G11560
74 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.816769) with  --  ACBP2
75 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=1.05541) with  --  AT3G53390
76 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.847371) with  --  AGL18
77 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.952207) with  --  AT5G42560
78 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.981724) with  --  AT4G17620
79 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.970927) with  --  SMU2
80 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  has similar expression pattern (mutual information value=0.810758) with  --  ATRCY1; RCY1
81 AT3G53930  --  has similar expression pattern (mutual information value=0.892681) with  --  SIS3  --  is the target gene of  --  ath-miR833a-3p
82 AT3G53930  --  has similar expression pattern (mutual information value=0.968537) with  --  AT5G45190  --  has similar expression pattern (mutual information value=0.806546) with  --  ATCUL3B; CUL3B
83 AT3G53930  --  has similar expression pattern (mutual information value=0.968537) with  --  AT5G45190  --  has similar expression pattern (mutual information value=0.968264) with  --  TGH
84 AT3G53930  --  has similar expression pattern (mutual information value=0.968537) with  --  AT5G45190  --  has similar expression pattern (mutual information value=0.845424) with  --  TAF4; TAF4B
85 AT3G53930  --  has similar expression pattern (mutual information value=0.968537) with  --  AT5G45190  --  has similar expression pattern (mutual information value=0.949358) with  --  AT5G25060
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