Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G55600
Type: Protein GRN ID: np40515 Name:
Annotation: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
Gene Locus: AT5G55600
Gene Expression (Affy ATH1 probeset): 248067_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910
3 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1
4 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680
5 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  interacts with  --  AT5G45780
6 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  has similar expression pattern (mutual information value=0.847014) with  --  AT1G56130
7 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  has similar expression pattern (mutual information value=0.847014) with  --  AT1G56120
8 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  has similar expression pattern (mutual information value=0.847014) with  --  AT1G56140
9 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  has similar expression pattern (mutual information value=0.870976) with  --  ARI5; ATARI5
10 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  has similar expression pattern (mutual information value=0.816106) with  --  AT3G63500
11 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  has similar expression pattern (mutual information value=0.915722) with  --  ATRCY1; RCY1
12 AT5G55600  --  has similar expression pattern (mutual information value=0.839058) with  --  AT2G45910  --  is modified by  --  ATMPK8; MPK8
13 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
14 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  interacts with  --  ATCLASP; CLASP
15 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  interacts with  --  BLOS1
16 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.82146) with  --  AT2G02570
17 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.833825) with  --  SKIP
18 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.830198) with  --  SBI1
19 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.880141) with  --  SCL5
20 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.851723) with  --  AT1G80550
21 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.80456) with  --  ANAC050; NAC050
22 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.80456) with  --  ANAC051; ANAC052; NAC052
23 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.828217) with  --  MED19A
24 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.894263) with  --  SNL2
25 AT5G55600  --  has similar expression pattern (mutual information value=0.897605) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.828187) with  --  AT5G17440
26 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.947392) with  --  AT2G38410
27 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.950975) with  --  AT1G61690
28 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.856248) with  --  emb1220
29 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.856248) with  --  AT3G60610
30 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.802219) with  --  AT2G36840
31 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.826075) with  --  AT1G32810
32 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=1.05453) with  --  GTE4
33 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.881676) with  --  ATGSTU20; GSTU20
34 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.9051) with  --  NHL8
35 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.9141) with  --  AT3G16940
36 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.813508) with  --  EMB3011
37 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.882649) with  --  AT5G16505
38 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.944852) with  --  AT5G49880
39 AT5G55600  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.922266) with  --  AT5G24870
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact