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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR1888a
Type: non-coding-miRNA GRN ID: nn06233 Name: ath-miR1888a
Annotation: Plant L-ascorbate oxidase [TCDB:8.A.21.2] [EC:1.10.3.3]
Gene Locus: AT5G21100
miRBase: Link
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate
3 ath-miR1888a  --  inhibit the expression of  --  AT4G14930
4 ath-miR1888a  --  inhibit the expression of  --  AT3G33595
5 ath-miR1888a  --  inhibit the expression of  --  AT1G53630
6 ath-miR1888a  --  inhibit the expression of  --  NHL8
7 ath-miR1888a  --  inhibit the expression of  --  AT1G18090
8 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  has product (in catalytic reaction)  --  Dehydroascorbate
9 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  APX5
10 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  APX3
11 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  APX6
12 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  APX4; TL29
13 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  SAPX
14 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  APX1B; APX2
15 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  TAPX
16 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  APX1; ATAPX01; ATAPX1; CS1; MEE6
17 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  AT5G21100
18 ath-miR1888a  --  has product (in catalytic reaction)  --  Monodehydroascorbate  --  is product (in catalytic reaction) of  --  sks12
19 ath-miR1888a  --  inhibit the expression of  --  AT4G14930  --  has product (in catalytic reaction)  --  Ribonucleoside
20 ath-miR1888a  --  inhibit the expression of  --  AT3G33595  --  is the target gene of  --  ath-miR845b
21 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  has similar expression pattern (mutual information value=0.868642) with  --  AT3G16940
22 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  has similar expression pattern (mutual information value=0.810137) with  --  CYCT1;4
23 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  has similar expression pattern (mutual information value=0.9051) with  --  AT5G16680
24 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  has similar expression pattern (mutual information value=0.810503) with  --  AT5G44080
25 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  has similar expression pattern (mutual information value=0.853206) with  --  ATEXO70F1; EXO70F1
26 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  has similar expression pattern (mutual information value=0.806799) with  --  AtCRLK2; CRLK2
27 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  is the target gene of  --  ath-miR172d
28 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  is the target gene of  --  ath-miR172c
29 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  is the target gene of  --  ath-miR172b-3p
30 ath-miR1888a  --  inhibit the expression of  --  NHL8  --  is the target gene of  --  ath-miR172a
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