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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G39260
Type: Protein GRN ID: np19415 Name:
Annotation: binding;RNA binding
Gene Locus: AT2G39260
Gene Expression (Affy ATH1 probeset): 267009_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160
3 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200
4 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B
5 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11
6 AT2G39260  --  has similar expression pattern (mutual information value=0.956269) with  --  ATCHR12
7 AT2G39260  --  has similar expression pattern (mutual information value=0.833954) with  --  ATPRP40B; PRP40B
8 AT2G39260  --  has similar expression pattern (mutual information value=0.909997) with  --  TGH
9 AT2G39260  --  has similar expression pattern (mutual information value=0.91123) with  --  AT5G55670
10 AT2G39260  --  has similar expression pattern (mutual information value=0.87507) with  --  AT5G25060
11 AT2G39260  --  has similar expression pattern (mutual information value=0.841535) with  --  AT5G19950
12 AT2G39260  --  has similar expression pattern (mutual information value=0.823541) with  --  KTF1; SPT5L
13 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.827551) with  --  AT2G40650
14 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.841161) with  --  ATRING1B; RING1B
15 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.839425) with  --  SKIP
16 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=1.08875) with  --  MBD10
17 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.848252) with  --  FRS8
18 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=1.04345) with  --  ATPC2
19 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.903624) with  --  AT3G06480
20 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=1.09474) with  --  SPT16
21 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.918621) with  --  AT4G17950
22 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=1.02121) with  --  AT3G47610
23 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.989719) with  --  AT5G13560
24 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.875825) with  --  AT5G46840
25 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.957516) with  --  AT5G47090
26 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=1.07271) with  --  At-RS41; ATRSP41; RS41
27 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.934735) with  --  ELF9
28 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=1.04687) with  --  DOT2; MDF
29 AT2G39260  --  has similar expression pattern (mutual information value=0.886416) with  --  AT2G02160  --  has similar expression pattern (mutual information value=0.961156) with  --  AT5G17440
30 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.821345) with  --  AT2G46200
31 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.897783) with  --  AT2G17410
32 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.963837) with  --  AtTPR; NUA
33 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.14492) with  --  CHR5
34 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.04373) with  --  AT1G15200
35 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.932022) with  --  AT2G01100
36 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.826946) with  --  AT2G47410
37 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.818666) with  --  ASHH1; ASHH1; SDG26
38 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.0307) with  --  AT3G12640
39 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.811798) with  --  GTE01; GTE1; IMB1
40 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.849291) with  --  AT3G19630
41 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.869287) with  --  AT5G28330
42 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.869287) with  --  AT5G28390
43 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.869287) with  --  AT3G52660
44 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.802089) with  --  AT3G62080
45 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.993002) with  --  ATSRL1
46 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.847991) with  --  ATXR7; SDG25
47 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.838533) with  --  AT5G53440
48 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.83947) with  --  MGO1; TOP1; TOP1ALPHA
49 AT2G39260  --  has similar expression pattern (mutual information value=0.875109) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.816066) with  --  ATPUB49; PUB49
50 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  interacts with  --  ADL2; DRP3A
51 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  has similar expression pattern (mutual information value=0.987943) with  --  ATSCC3; SCC3
52 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  has similar expression pattern (mutual information value=0.887161) with  --  ARF12
53 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  has similar expression pattern (mutual information value=0.87531) with  --  EIF4B1
54 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  has similar expression pattern (mutual information value=0.846872) with  --  ATFKBP13; FKBP13
55 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  has similar expression pattern (mutual information value=0.891913) with  --  AT1G48900
56 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  has similar expression pattern (mutual information value=0.926719) with  --  AT1G31870
57 AT2G39260  --  has similar expression pattern (mutual information value=0.819198) with  --  DRP3B  --  has product (in catalytic reaction)  --  GDP
58 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  interacts with  --  AT1G18950
59 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  interacts with  --  AT5G35210
60 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  interacts with  --  AT5G44180
61 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  interacts with  --  HB-1
62 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.1506) with  --  ATVT-1; HVT1
63 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.838746) with  --  AT2G32730
64 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.27858) with  --  AT1G60900
65 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.27858) with  --  AT1G60830
66 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.897621) with  --  ATRX; CHR20
67 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.02446) with  --  ATCDC5; ATMYBCDC5; CDC5
68 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.03281) with  --  SMP1
69 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.828396) with  --  AT1G78620
70 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.884019) with  --  AT1G80790
71 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.897655) with  --  GTD1; HAC13; HAF01; HAF1; TAF1
72 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.943386) with  --  AT1G01930
73 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.991476) with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1
74 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.10313) with  --  AT1G74250
75 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.963083) with  --  AT1G02330
76 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.02979) with  --  UNE6
77 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.98126) with  --  AT3G09360
78 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.896391) with  --  AT3G04160
79 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.946056) with  --  ATPRP40C; PRP40C
80 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.825488) with  --  AT3G20390
81 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.99274) with  --  AT3G12140
82 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.91052) with  --  ATMBD8; MBD8
83 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.836478) with  --  AT4G10930
84 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.14725) with  --  AT4G31880
85 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.01963) with  --  GAUT3
86 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.909472) with  --  AT3G53390
87 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.908066) with  --  SUA
88 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.923374) with  --  AT5G14440
89 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.844602) with  --  AT5G43490
90 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.844602) with  --  AT5G48610
91 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.890835) with  --  CPL4
92 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.08053) with  --  HOS15
93 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.803729) with  --  AT5G27010
94 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.803729) with  --  AT5G06350
95 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=0.887199) with  --  SMP2
96 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.09971) with  --  AT4G17620
97 AT2G39260  --  has similar expression pattern (mutual information value=0.924701) with  --  CHR11  --  has similar expression pattern (mutual information value=1.12066) with  --  FAR1
98 AT2G39260  --  has similar expression pattern (mutual information value=0.956269) with  --  ATCHR12  --  has similar expression pattern (mutual information value=0.853418) with  --  BRIZ2
99 AT2G39260  --  has similar expression pattern (mutual information value=0.956269) with  --  ATCHR12  --  has similar expression pattern (mutual information value=0.850998) with  --  AT5G10950
100 AT2G39260  --  has similar expression pattern (mutual information value=0.909997) with  --  TGH  --  has similar expression pattern (mutual information value=0.925414) with  --  AT4G21660
101 AT2G39260  --  has similar expression pattern (mutual information value=0.909997) with  --  TGH  --  has similar expression pattern (mutual information value=0.925414) with  --  AT1G11520
102 AT2G39260  --  has similar expression pattern (mutual information value=0.909997) with  --  TGH  --  has similar expression pattern (mutual information value=0.936168) with  --  AT1G15940
103 AT2G39260  --  has similar expression pattern (mutual information value=0.909997) with  --  TGH  --  has similar expression pattern (mutual information value=0.968264) with  --  AT5G45190
104 AT2G39260  --  has similar expression pattern (mutual information value=0.909997) with  --  TGH  --  has similar expression pattern (mutual information value=0.867655) with  --  AT1G25988
105 AT2G39260  --  has similar expression pattern (mutual information value=0.909997) with  --  TGH  --  has similar expression pattern (mutual information value=0.867655) with  --  AT1G25682
106 AT2G39260  --  has similar expression pattern (mutual information value=0.91123) with  --  AT5G55670  --  has similar expression pattern (mutual information value=0.848719) with  --  AT2G38420
107 AT2G39260  --  has similar expression pattern (mutual information value=0.91123) with  --  AT5G55670  --  has similar expression pattern (mutual information value=0.880416) with  --  AT3G17160
108 AT2G39260  --  has similar expression pattern (mutual information value=0.91123) with  --  AT5G55670  --  has similar expression pattern (mutual information value=0.853437) with  --  LWD2
109 AT2G39260  --  has similar expression pattern (mutual information value=0.91123) with  --  AT5G55670  --  has similar expression pattern (mutual information value=0.82418) with  --  AT3G44690
110 AT2G39260  --  has similar expression pattern (mutual information value=0.91123) with  --  AT5G55670  --  has similar expression pattern (mutual information value=1.06662) with  --  SMU2
111 AT2G39260  --  has similar expression pattern (mutual information value=0.87507) with  --  AT5G25060  --  interacts with  --  ATWEE1; WEE1
112 AT2G39260  --  has similar expression pattern (mutual information value=0.87507) with  --  AT5G25060  --  interacts with  --  DRT111
113 AT2G39260  --  has similar expression pattern (mutual information value=0.87507) with  --  AT5G25060  --  has similar expression pattern (mutual information value=0.873723) with  --  ATCUL3B; CUL3B
114 AT2G39260  --  has similar expression pattern (mutual information value=0.87507) with  --  AT5G25060  --  has similar expression pattern (mutual information value=0.853049) with  --  AT5G44080
115 AT2G39260  --  has similar expression pattern (mutual information value=0.87507) with  --  AT5G25060  --  has similar expression pattern (mutual information value=0.944607) with  --  AT5G25520
116 AT2G39260  --  has similar expression pattern (mutual information value=0.841535) with  --  AT5G19950  --  has similar expression pattern (mutual information value=0.831871) with  --  AT2G21230
117 AT2G39260  --  has similar expression pattern (mutual information value=0.841535) with  --  AT5G19950  --  has similar expression pattern (mutual information value=0.901983) with  --  ASIL2
118 AT2G39260  --  has similar expression pattern (mutual information value=0.841535) with  --  AT5G19950  --  interacts with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
119 AT2G39260  --  has similar expression pattern (mutual information value=0.823541) with  --  KTF1; SPT5L  --  interacts with  --  AGO4; OCP11
120 AT2G39260  --  has similar expression pattern (mutual information value=0.823541) with  --  KTF1; SPT5L  --  has similar expression pattern (mutual information value=0.840237) with  --  AT3G43240
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

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