Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATVT-1; HVT1
Type: Protein GRN ID: np20288 Name: ATVT-1; HVT1
Annotation: HVT1, ATVT-1 | helicase in vascular tissue and tapetum
Gene Locus: AT2G30800
Gene Expression (Affy ATH1 probeset): 267570_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11
3 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  interacts with  --  AT1G18950
4 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  interacts with  --  AT5G35210
5 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  interacts with  --  AT5G44180
6 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  interacts with  --  HB-1
7 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.838746) with  --  AT2G32730
8 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.924701) with  --  AT2G39260
9 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.16719) with  --  ATSCC3; SCC3
10 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.27858) with  --  AT1G60900
11 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.27858) with  --  AT1G60830
12 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.897621) with  --  ATRX; CHR20
13 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.02446) with  --  ATCDC5; ATMYBCDC5; CDC5
14 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.03281) with  --  SMP1
15 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.24238) with  --  AT1G60200
16 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.828396) with  --  AT1G78620
17 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.03768) with  --  MBD10
18 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.884019) with  --  AT1G80790
19 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.897655) with  --  GTD1; HAC13; HAF01; HAF1; TAF1
20 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.943386) with  --  AT1G01930
21 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.991476) with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1
22 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.902059) with  --  AT2G47410
23 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.10313) with  --  AT1G74250
24 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.963083) with  --  AT1G02330
25 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.02979) with  --  UNE6
26 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.98126) with  --  AT3G09360
27 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.896391) with  --  AT3G04160
28 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.946056) with  --  ATPRP40C; PRP40C
29 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.825488) with  --  AT3G20390
30 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.971345) with  --  EIF4B1
31 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.99274) with  --  AT3G12140
32 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.91052) with  --  ATMBD8; MBD8
33 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.836478) with  --  AT4G10930
34 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.14725) with  --  AT4G31880
35 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.01963) with  --  GAUT3
36 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.909472) with  --  AT3G53390
37 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.908066) with  --  SUA
38 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.923374) with  --  AT5G14440
39 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.844602) with  --  AT5G43490
40 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.844602) with  --  AT5G48610
41 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.02523) with  --  At-RS41; ATRSP41; RS41
42 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.02811) with  --  AT5G55670
43 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.890835) with  --  CPL4
44 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.08053) with  --  HOS15
45 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.895611) with  --  ATPUB49; PUB49
46 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.803729) with  --  AT5G27010
47 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.803729) with  --  AT5G06350
48 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.96967) with  --  DOT2; MDF
49 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.14971) with  --  AT1G31870
50 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=0.887199) with  --  SMP2
51 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.09971) with  --  AT4G17620
52 ATVT-1; HVT1  --  has similar expression pattern (mutual information value=1.1506) with  --  CHR11  --  has similar expression pattern (mutual information value=1.12066) with  --  FAR1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact