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Location:  Home > Details for node AT5G53440
Type: Protein GRN ID: np38903 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G53440
Gene Expression (Affy ATH1 probeset): 248266_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200
3 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.875109) with  --  AT2G39260
4 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.821345) with  --  AT2G46200
5 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.897783) with  --  AT2G17410
6 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.963837) with  --  AtTPR; NUA
7 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.14492) with  --  CHR5
8 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.04373) with  --  AT1G15200
9 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.932022) with  --  AT2G01100
10 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.826946) with  --  AT2G47410
11 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.818666) with  --  ASHH1; ASHH1; SDG26
12 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.24238) with  --  CHR11
13 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.0307) with  --  AT3G12640
14 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.811798) with  --  GTE01; GTE1; IMB1
15 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.936743) with  --  ATPRP40B; PRP40B
16 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.849291) with  --  AT3G19630
17 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.869287) with  --  AT5G28330
18 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.869287) with  --  AT5G28390
19 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.869287) with  --  AT3G52660
20 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.802089) with  --  AT3G62080
21 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.993002) with  --  ATSRL1
22 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.847991) with  --  ATXR7; SDG25
23 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=1.02346) with  --  At-RS41; ATRSP41; RS41
24 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.83947) with  --  MGO1; TOP1; TOP1ALPHA
25 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.816066) with  --  ATPUB49; PUB49
26 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.900867) with  --  ELF9
27 AT5G53440  --  has similar expression pattern (mutual information value=0.838533) with  --  AT1G60200  --  has similar expression pattern (mutual information value=0.891596) with  --  AT5G17440
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