Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G41090
Type: Protein GRN ID: np18549 Name:
Annotation: Calcium-binding EF-hand family protein [TCDB:9.A.5.1]
Gene Locus: AT2G41090
Gene Expression (Affy ATH1 probeset): 267076_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR
3 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  AT1G72910
4 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750
5 AT2G41090  --  has similar expression pattern (mutual information value=1.00479) with  --  PRO25; WAK1
6 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2
7 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1
8 AT2G41090  --  has similar expression pattern (mutual information value=0.8226) with  --  AT4G02420
9 AT2G41090  --  has similar expression pattern (mutual information value=0.964372) with  --  AT4G13840
10 AT2G41090  --  has similar expression pattern (mutual information value=0.826472) with  --  AT5G22580
11 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR  --  interacts with  --  AXR2
12 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR  --  interacts with  --  ATRBX1
13 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR  --  has similar expression pattern (mutual information value=0.99223) with  --  ATCNGC11; CNGC11; CNGC11
14 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR  --  has similar expression pattern (mutual information value=0.99223) with  --  ATCNGC3; CNGC3; CNGC3.C
15 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR  --  has similar expression pattern (mutual information value=0.877727) with  --  AT1G74640
16 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR  --  has similar expression pattern (mutual information value=0.944859) with  --  SVL2
17 AT2G41090  --  has similar expression pattern (mutual information value=1.05168) with  --  TIR  --  has similar expression pattern (mutual information value=0.846368) with  --  ATRING1; RING1
18 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.22643) with  --  PY; THIC
19 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.07364) with  --  AT2G35260
20 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.917543) with  --  ATLTP1; LP1; LTP1
21 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.01361) with  --  AT2G25510
22 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.07201) with  --  PSBX
23 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.917264) with  --  AT2G22680
24 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.888341) with  --  AT1G54820
25 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.965585) with  --  ATGLK1; GLK1; GPRI1
26 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.00978) with  --  LSH10
27 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.11939) with  --  PSAD-2
28 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.06541) with  --  LQY1
29 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.03661) with  --  PSS1
30 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.09612) with  --  PSAO
31 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.08421) with  --  AT1G75460
32 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.01172) with  --  AT1G69730
33 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.935922) with  --  AT1G68520
34 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.07514) with  --  AT1G73655
35 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.02457) with  --  ATGER1; GER1; GLP1
36 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.11634) with  --  PSAH-2; PSAH2; PSI-H
37 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.16634) with  --  PSAH-1
38 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.801751) with  --  AtRLP37; EMB2800; RLP37
39 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.801751) with  --  AtRLP38; RLP38
40 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.91713) with  --  AT3G21950
41 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.17785) with  --  PSBTN
42 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.91763) with  --  AT1G31550
43 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.06367) with  --  LBD21
44 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.818086) with  --  CRK40
45 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.818086) with  --  CRK39
46 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.10141) with  --  PSAL
47 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.844186) with  --  PORB
48 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.0181) with  --  AT5G19250
49 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.913989) with  --  AT5G55450
50 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.838808) with  --  AtMYB28; HAG1; MYB28; PMG1
51 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.913421) with  --  AT5G63180
52 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.903573) with  --  ATRD22; RD22
53 AT2G41090  --  has similar expression pattern (mutual information value=1.07555) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.09066) with  --  ACD6
54 AT2G41090  --  has similar expression pattern (mutual information value=1.00479) with  --  PRO25; WAK1  --  interacts with  --  ATGRP-3; ATGRP3; GRP-3; GRP3
55 AT2G41090  --  has similar expression pattern (mutual information value=1.00479) with  --  PRO25; WAK1  --  interacts with  --  OE23; OEE2; PSBP-1; PSII-P
56 AT2G41090  --  has similar expression pattern (mutual information value=1.00479) with  --  PRO25; WAK1  --  has similar expression pattern (mutual information value=0.897039) with  --  AT3G22235
57 AT2G41090  --  has similar expression pattern (mutual information value=1.00479) with  --  PRO25; WAK1  --  has similar expression pattern (mutual information value=0.897039) with  --  PCC1
58 AT2G41090  --  has similar expression pattern (mutual information value=1.00479) with  --  PRO25; WAK1  --  transport  --  Lithium
59 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  interacts with  --  ERS2
60 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  interacts with  --  AT4G18220
61 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  interacts with  --  ATCNGC13; CNGC13
62 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  interacts with  --  ATCNGC18; CNGC18
63 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
64 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  has similar expression pattern (mutual information value=0.844293) with  --  AT1G51805
65 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  has similar expression pattern (mutual information value=0.805347) with  --  AT4G27300
66 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  is the target gene of  --  ath-miR399c
67 AT2G41090  --  has similar expression pattern (mutual information value=0.961702) with  --  WAK2  --  is the target gene of  --  ath-miR399b
68 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.896822) with  --  PPL2
69 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.05866) with  --  AT2G03550
70 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.987823) with  --  PQL1; PQL2
71 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.898099) with  --  CRR23
72 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.820248) with  --  IGMT4
73 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.871603) with  --  ATBG1; BGL1; BGLU18
74 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.939671) with  --  ATBCA1; ATSABP3; CA1; SABP3
75 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.911029) with  --  PIFI
76 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.874425) with  --  AOC2
77 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.874425) with  --  AOC1
78 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.874144) with  --  AT4G00780
79 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.851967) with  --  AT3G63160
80 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.81513) with  --  AT5G03350
81 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.87281) with  --  AT5G44580
82 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.989408) with  --  RGF9
83 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.906056) with  --  AT5G14970
84 AT2G41090  --  has similar expression pattern (mutual information value=1.09332) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.863517) with  --  AT5G20935
85 AT2G41090  --  has similar expression pattern (mutual information value=0.8226) with  --  AT4G02420  --  has similar expression pattern (mutual information value=0.888161) with  --  AT1G65230
86 AT2G41090  --  has similar expression pattern (mutual information value=0.8226) with  --  AT4G02420  --  has similar expression pattern (mutual information value=0.83176) with  --  AT1G70820
87 AT2G41090  --  has similar expression pattern (mutual information value=0.964372) with  --  AT4G13840  --  has similar expression pattern (mutual information value=0.884909) with  --  AT3G48720
88 AT2G41090  --  has similar expression pattern (mutual information value=0.964372) with  --  AT4G13840  --  has similar expression pattern (mutual information value=1.01618) with  --  LTP5
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact