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Location:  Home > Details for node RGF9
Type: Protein GRN ID: np41084 Name: RGF9
Annotation: RGF9 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
Gene Locus: AT5G64770
Gene Expression (Affy ATH1 probeset): 247252_at    
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550
3 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820
4 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1
5 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2
6 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.895054) with  --  AT2G31040
7 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.943105) with  --  AT2G29290
8 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.945052) with  --  AT2G29310
9 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.80515) with  --  AT2G15580
10 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=1.07052) with  --  AT1G54820
11 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.913851) with  --  ASE1; ATASE; ATASE1
12 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.969747) with  --  PQL1; PQL2
13 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.973931) with  --  CRR23
14 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.953897) with  --  NDH-O
15 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.994214) with  --  AT1G75460
16 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.921046) with  --  ATBCA1; ATSABP3; CA1; SABP3
17 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.988293) with  --  PIFI
18 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.820715) with  --  AOC2
19 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.820715) with  --  AOC1
20 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.926295) with  --  LHCA2*1; LHCA6
21 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.919208) with  --  AT4G00780
22 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=1.06066) with  --  AT4G01130
23 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.965718) with  --  AT3G62550
24 RGF9  --  has similar expression pattern (mutual information value=0.892699) with  --  AT2G03550  --  has similar expression pattern (mutual information value=0.87601) with  --  ATCNGC4; CNGC4; DND2; HLM1
25 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820  --  has similar expression pattern (mutual information value=1.00836) with  --  AT1G65230
26 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G54520
27 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.83176) with  --  AT4G02420
28 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.947268) with  --  AT4G26530
29 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.819829) with  --  AT5G01015
30 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820  --  has similar expression pattern (mutual information value=1.10962) with  --  AT5G35170
31 RGF9  --  has similar expression pattern (mutual information value=0.921921) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.832124) with  --  AT5G14970
32 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.09332) with  --  AT2G41090
33 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.896822) with  --  PPL2
34 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.12292) with  --  AT2G25510
35 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.906597) with  --  ATGRP-3; ATGRP3; GRP-3; GRP3
36 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.06691) with  --  AT1G49750
37 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.820248) with  --  IGMT4
38 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.871603) with  --  ATBG1; BGL1; BGLU18
39 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.05848) with  --  WAK2
40 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.04601) with  --  AT3G22235
41 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.04601) with  --  PCC1
42 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.894842) with  --  AT1G51805
43 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.810373) with  --  CRK40
44 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.810373) with  --  CRK39
45 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.02067) with  --  AT4G13840
46 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.851967) with  --  AT3G63160
47 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.81513) with  --  AT5G03350
48 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.854911) with  --  AT5G22580
49 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.87281) with  --  AT5G44580
50 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.890345) with  --  AT5G55450
51 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.816431) with  --  ATRD22; RD22
52 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=0.863517) with  --  AT5G20935
53 RGF9  --  has similar expression pattern (mutual information value=0.989408) with  --  CXC750; ECS1  --  has similar expression pattern (mutual information value=1.04675) with  --  ACD6
54 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  interacts with  --  ATPP7; PP7
55 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  interacts with  --  ATPUP3; PUP3
56 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  interacts with  --  ATCPK1; CPK1
57 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  interacts with  --  AKT1
58 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  interacts with  --  AHG3/pp2ca
59 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  interacts with  --  ABI1 family46, coding gene
60 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  interacts with  --  KAT1
61 RGF9  --  has similar expression pattern (mutual information value=0.812269) with  --  AKT2  --  is the target gene of  --  ath-miR838
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