Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G48720
Type: Protein GRN ID: np24679 Name:
Annotation: HXXXD-type acyl-transferase family protein
Gene Locus: AT3G48720
Gene Expression (Affy ATH1 probeset): 252317_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660
3 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3
4 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840
5 AT3G48720  --  has similar expression pattern (mutual information value=0.831924) with  --  AT4G28780
6 AT3G48720  --  has similar expression pattern (mutual information value=0.810291) with  --  AT5G44680
7 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5
8 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.855956) with  --  AT2G35260
9 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.888107) with  --  AT1G54820
10 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.845949) with  --  PETE1
11 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.854123) with  --  AT1G29670
12 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.803182) with  --  LHCB4.2
13 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.868958) with  --  ATEXP5; ATEXPA5; ATHEXP ALPHA 1.4; EXP5; EXPA5
14 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.898884) with  --  AtGPAT8; GPAT8
15 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.822405) with  --  ATT1; CYP86A2
16 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.841779) with  --  AT4G00780
17 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.83425) with  --  AT4G38840
18 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.856703) with  --  AT5G55620
19 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.806448) with  --  MSP-1; OE33; OEE1; OEE33; PSBO-1; PSBO1
20 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.830937) with  --  ATRD22; RD22
21 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.853393) with  --  tgg2/myrosinase 2
22 AT3G48720  --  has similar expression pattern (mutual information value=0.893976) with  --  AT1G29660  --  has similar expression pattern (mutual information value=0.853393) with  --  tgg1/myrosinase 1
23 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  ATBT4; BT4
24 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  AHA2; HA2; PMA2
25 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  APE1
26 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  AT2G28960
27 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  AT3G59780
28 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  AT4G16620
29 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  AT5G25260
30 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  AT1G05640
31 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  AT2G01680
32 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  ABCG23
33 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  interacts with  --  NDL1
34 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=0.891533) with  --  AT2G29290
35 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=0.921046) with  --  AT2G03550
36 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=0.820452) with  --  AT2G21210
37 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=1.13552) with  --  CRR23
38 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=1.11123) with  --  ATGER1; GER1; GLP1
39 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=0.939671) with  --  CXC750; ECS1
40 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=1.14821) with  --  LHCA2*1; LHCA6
41 AT3G48720  --  has similar expression pattern (mutual information value=0.841486) with  --  ATBCA1; ATSABP3; CA1; SABP3  --  has similar expression pattern (mutual information value=1.20905) with  --  PETC; PGR1
42 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840  --  has similar expression pattern (mutual information value=0.964372) with  --  AT2G41090
43 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840  --  has similar expression pattern (mutual information value=0.820428) with  --  IGMT4
44 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840  --  has similar expression pattern (mutual information value=0.949019) with  --  ATBG1; BGL1; BGLU18
45 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840  --  has similar expression pattern (mutual information value=0.950409) with  --  WAK2
46 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840  --  has similar expression pattern (mutual information value=0.860196) with  --  AT4G02420
47 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840  --  has similar expression pattern (mutual information value=0.805599) with  --  AT4G27300
48 AT3G48720  --  has similar expression pattern (mutual information value=0.884909) with  --  AT4G13840  --  has similar expression pattern (mutual information value=1.01618) with  --  LTP5
49 AT3G48720  --  has similar expression pattern (mutual information value=0.831924) with  --  AT4G28780  --  has similar expression pattern (mutual information value=0.925794) with  --  AT1G11850
50 AT3G48720  --  has similar expression pattern (mutual information value=0.831924) with  --  AT4G28780  --  has similar expression pattern (mutual information value=0.813526) with  --  MLP423
51 AT3G48720  --  has similar expression pattern (mutual information value=0.831924) with  --  AT4G28780  --  has similar expression pattern (mutual information value=0.806618) with  --  AT1G74730
52 AT3G48720  --  has similar expression pattern (mutual information value=0.831924) with  --  AT4G28780  --  has similar expression pattern (mutual information value=0.821476) with  --  GAPA-2
53 AT3G48720  --  has similar expression pattern (mutual information value=0.831924) with  --  AT4G28780  --  has similar expression pattern (mutual information value=0.806025) with  --  ATCYP38; CYP38
54 AT3G48720  --  has similar expression pattern (mutual information value=0.810291) with  --  AT5G44680  --  has similar expression pattern (mutual information value=1.0062) with  --  AT2G18300
55 AT3G48720  --  has similar expression pattern (mutual information value=0.810291) with  --  AT5G44680  --  has similar expression pattern (mutual information value=0.852422) with  --  AT1G15260
56 AT3G48720  --  has similar expression pattern (mutual information value=0.810291) with  --  AT5G44680  --  has similar expression pattern (mutual information value=0.876555) with  --  AT1G68780
57 AT3G48720  --  has similar expression pattern (mutual information value=0.810291) with  --  AT5G44680  --  has similar expression pattern (mutual information value=0.942229) with  --  iqd21
58 AT3G48720  --  has similar expression pattern (mutual information value=0.810291) with  --  AT5G44680  --  has similar expression pattern (mutual information value=0.861711) with  --  ATMIXTA; ATMYB16; MYB16
59 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.969843) with  --  TCP10
60 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.870009) with  --  ATLTP1; LP1; LTP1
61 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.982005) with  --  PSB27
62 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.919156) with  --  ATGLK1; GLK1; GPRI1
63 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.914452) with  --  AT2G28605
64 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=1.00182) with  --  TCP3
65 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=1.00859) with  --  AT3G08920
66 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.934041) with  --  AT3G25805
67 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.884258) with  --  SSR16
68 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.930348) with  --  AT3G56650
69 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.937907) with  --  AT5G51110
70 AT3G48720  --  has similar expression pattern (mutual information value=0.812562) with  --  YAB5  --  has similar expression pattern (mutual information value=0.897776) with  --  AT5G65220
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact