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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR399c
Type: non-coding-miRNA GRN ID: nn05979 Name: ath-miR399c
Annotation: MIR399C | MIR399C; miRNA
Gene Locus: AT5G62162
miRBase: Link
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR399c  --  inhibit the expression of  --  ATUBC24; PHO2; UBC24
3 ath-miR399c  --  inhibit the expression of  --  WAK2
4 ath-miR399c  --  inhibit the expression of  --  ATUBC24; PHO2; UBC24  --  interacts with  --  ATPHO1; PHO1
5 ath-miR399c  --  inhibit the expression of  --  ATUBC24; PHO2; UBC24  --  is the target gene of  --  ath-miR399f
6 ath-miR399c  --  inhibit the expression of  --  ATUBC24; PHO2; UBC24  --  is the target gene of  --  ath-miR399e
7 ath-miR399c  --  inhibit the expression of  --  ATUBC24; PHO2; UBC24  --  is the target gene of  --  ath-miR399d
8 ath-miR399c  --  inhibit the expression of  --  ATUBC24; PHO2; UBC24  --  is the target gene of  --  ath-miR399b
9 ath-miR399c  --  inhibit the expression of  --  ATUBC24; PHO2; UBC24  --  is the target gene of  --  ath-miR399a
10 ath-miR399c  --  inhibit the expression of  --  WAK2  --  interacts with  --  ERS2
11 ath-miR399c  --  inhibit the expression of  --  WAK2  --  interacts with  --  AT4G18220
12 ath-miR399c  --  inhibit the expression of  --  WAK2  --  interacts with  --  ATCNGC13; CNGC13
13 ath-miR399c  --  inhibit the expression of  --  WAK2  --  interacts with  --  ATCNGC18; CNGC18
14 ath-miR399c  --  inhibit the expression of  --  WAK2  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
15 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.961702) with  --  AT2G41090
16 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=1.07969) with  --  PRO25; WAK1
17 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=1.05848) with  --  CXC750; ECS1
18 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.844293) with  --  AT1G51805
19 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.936022) with  --  SVL2
20 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.870085) with  --  AT4G02420
21 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.856767) with  --  CRK40
22 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.856767) with  --  CRK39
23 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.950409) with  --  AT4G13840
24 ath-miR399c  --  inhibit the expression of  --  WAK2  --  has similar expression pattern (mutual information value=0.805347) with  --  AT4G27300
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