Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATCNGC3; CNGC3; CNGC3.C
Type: Protein GRN ID: np20361 Name: ATCNGC3; CNGC3; CNGC3.C
Annotation: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleotide gated channel 3 [TCDB:1.A.26.1]
Gene Locus: AT2G46430
Gene Expression (Affy ATH1 probeset): 263776_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016
3 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510
4 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  TIR
5 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  AT1G72910
6 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT5G37090
7 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT5G28300
8 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT3G62499
9 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  ATX3; SDG14
10 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT3G32027
11 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT3G13825
12 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT3G01030
13 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  DVL11; RTFL8
14 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT2G05087
15 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT2G03915
16 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  SECA2
17 ATCNGC3; CNGC3; CNGC3.C  --  is the target gene of  --  ath-miR5016  --  inhibit the expression of  --  AT1G11806
18 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.872718) with  --  LURP1
19 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.894172) with  --  AT2G22680
20 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.932928) with  --  ATCNGC11; CNGC11; CNGC11
21 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.913449) with  --  AT2G24860
22 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=1.01361) with  --  AT1G49750
23 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.934036) with  --  PRO25; WAK1
24 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.826752) with  --  AT3G28080
25 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=1.23744) with  --  AT3G22235
26 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=1.23744) with  --  PCC1
27 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=1.12292) with  --  CXC750; ECS1
28 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.840808) with  --  ATHM2
29 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.858998) with  --  AT4G04750
30 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=1.01034) with  --  AT5G10760
31 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.838497) with  --  AT5G37360
32 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.936093) with  --  AT5G55450
33 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=0.848485) with  --  ATSYTD; NTMC2T2.2; NTMC2TYPE2.2; SYT4; SYTD
34 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.932928) with  --  AT2G25510  --  has similar expression pattern (mutual information value=1.04251) with  --  ACD6
35 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  TIR  --  interacts with  --  AXR2
36 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  TIR  --  interacts with  --  ATRBX1
37 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  TIR  --  has similar expression pattern (mutual information value=1.05168) with  --  AT2G41090
38 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  TIR  --  has similar expression pattern (mutual information value=0.877727) with  --  AT1G74640
39 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  TIR  --  has similar expression pattern (mutual information value=0.944859) with  --  SVL2
40 ATCNGC3; CNGC3; CNGC3.C  --  has similar expression pattern (mutual information value=0.99223) with  --  TIR  --  has similar expression pattern (mutual information value=0.846368) with  --  ATRING1; RING1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact