Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node LSH10
Type: Protein GRN ID: np18587 Name: LSH10
Annotation: LSH10 | Protein of unknown function (DUF640)
Gene Locus: AT2G42610
Gene Expression (Affy ATH1 probeset): 263498_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750
3 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H
4 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.07555) with  --  AT2G41090
5 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.22643) with  --  PY; THIC
6 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.07364) with  --  AT2G35260
7 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.917543) with  --  ATLTP1; LP1; LTP1
8 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.01361) with  --  AT2G25510
9 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.07201) with  --  PSBX
10 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.917264) with  --  AT2G22680
11 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.888341) with  --  AT1G54820
12 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.965585) with  --  ATGLK1; GLK1; GPRI1
13 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.11939) with  --  PSAD-2
14 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.06541) with  --  LQY1
15 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.03661) with  --  PSS1
16 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.09612) with  --  PSAO
17 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.08421) with  --  AT1G75460
18 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.01172) with  --  AT1G69730
19 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.935922) with  --  AT1G68520
20 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.07514) with  --  AT1G73655
21 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.02457) with  --  ATGER1; GER1; GLP1
22 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.16634) with  --  PSAH-1
23 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.801751) with  --  AtRLP37; EMB2800; RLP37
24 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.801751) with  --  AtRLP38; RLP38
25 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.91713) with  --  AT3G21950
26 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.17785) with  --  PSBTN
27 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.06691) with  --  CXC750; ECS1
28 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.91763) with  --  AT1G31550
29 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.06367) with  --  LBD21
30 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.35758) with  --  SVL2
31 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.818086) with  --  CRK40
32 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.818086) with  --  CRK39
33 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.10141) with  --  PSAL
34 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.844186) with  --  PORB
35 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.918971) with  --  ATRING1; RING1
36 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.0181) with  --  AT5G19250
37 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.913989) with  --  AT5G55450
38 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.838808) with  --  AtMYB28; HAG1; MYB28; PMG1
39 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.913421) with  --  AT5G63180
40 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=0.903573) with  --  ATRD22; RD22
41 LSH10  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G49750  --  has similar expression pattern (mutual information value=1.09066) with  --  ACD6
42 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.59436) with  --  AT2G42220
43 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.00167) with  --  AT2G44210
44 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=0.962592) with  --  ATBZIP12; DPBF4; EEL
45 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=0.80273) with  --  ATRX; CHR20
46 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.55714) with  --  TLP18.3
47 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=0.858583) with  --  NHL12
48 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.48052) with  --  OE23; OEE2; PSBP-1; PSII-P
49 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.46848) with  --  ATHX; ATX; THX
50 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.59563) with  --  AT1G74730
51 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=0.929748) with  --  AT1G56145
52 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=0.970188) with  --  FMO GS-OX1
53 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=0.830833) with  --  PYM
54 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.46984) with  --  ATFD2; FED A
55 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.60692) with  --  CP24; LHCB6
56 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.65032) with  --  ATF1; TRXF1
57 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.53272) with  --  PSBQ; PSBQ-2; PSII-Q
58 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.76896) with  --  ATPD; PDE332
59 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.81668) with  --  PSBQ; PSBQ-1; PSBQA
60 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.64267) with  --  AT4G27700
61 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.61972) with  --  PSAE-1
62 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.31415) with  --  ATGRXCP; CXIP1
63 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.484) with  --  AT5G08050
64 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.2136) with  --  AT5G38980
65 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.32341) with  --  APE2; TPT
66 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.43115) with  --  AT5G57345
67 LSH10  --  has similar expression pattern (mutual information value=0.933451) with  --  PSAH-2; PSAH2; PSI-H  --  has similar expression pattern (mutual information value=1.63212) with  --  PSBY; YCF32
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact