Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G44510
Type: non-coding-other GRN ID: nn00125 Name:
Annotation: transposable element gene
Gene Locus: AT1G44510
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104
3 AT1G44510  --  has similar expression pattern (mutual information value=0.835479) with  --  AT2G35590
4 AT1G44510  --  has similar expression pattern (mutual information value=0.885256) with  --  AT4G06624
5 AT1G44510  --  has similar expression pattern (mutual information value=0.885256) with  --  AT1G42370
6 AT1G44510  --  has similar expression pattern (mutual information value=0.885256) with  --  AT1G42360
7 AT1G44510  --  has similar expression pattern (mutual information value=0.86622) with  --  AT1G63200
8 AT1G44510  --  has similar expression pattern (mutual information value=0.899463) with  --  AT2G39240
9 AT1G44510  --  has similar expression pattern (mutual information value=0.978586) with  --  AT5G25290
10 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4
11 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  interacts with  --  PFT1
12 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR858b
13 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR858a
14 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR319c
15 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR159c
16 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR319b
17 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR319a
18 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR159b
19 AT1G44510  --  has similar expression pattern (mutual information value=0.879928) with  --  AtMYB104; MYB104  --  is the target gene of  --  ath-miR159a
20 AT1G44510  --  has similar expression pattern (mutual information value=0.835479) with  --  AT2G35590  --  has similar expression pattern (mutual information value=0.840877) with  --  AT1G60570
21 AT1G44510  --  has similar expression pattern (mutual information value=0.835479) with  --  AT2G35590  --  has similar expression pattern (mutual information value=0.854252) with  --  AT1G61510
22 AT1G44510  --  has similar expression pattern (mutual information value=0.835479) with  --  AT2G35590  --  has similar expression pattern (mutual information value=0.854252) with  --  AT4G22450
23 AT1G44510  --  has similar expression pattern (mutual information value=0.835479) with  --  AT2G35590  --  has similar expression pattern (mutual information value=0.907451) with  --  AT4G39753
24 AT1G44510  --  has similar expression pattern (mutual information value=0.835479) with  --  AT2G35590  --  has similar expression pattern (mutual information value=0.807795) with  --  AT3G49770
25 AT1G44510  --  has similar expression pattern (mutual information value=0.978586) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.942647) with  --  AT2G21930
26 AT1G44510  --  has similar expression pattern (mutual information value=0.978586) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.805515) with  --  AT1G47660
27 AT1G44510  --  has similar expression pattern (mutual information value=0.978586) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.836163) with  --  AT1G63540
28 AT1G44510  --  has similar expression pattern (mutual information value=0.978586) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.991457) with  --  AT4G29200
29 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  interacts with  --  PTF1; TCP13; TFPD
30 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  interacts with  --  ATHDG11; EDT1; HDG11
31 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  interacts with  --  AT3G11590
32 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=1.00321) with  --  AT1G78720
33 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.818) with  --  AT2G24660
34 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.869287) with  --  AT1G31100
35 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.90529) with  --  AT2G16410
36 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.906889) with  --  AT1G64250
37 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.8322) with  --  AT3G25160
38 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.822415) with  --  AT2G33260
39 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.904083) with  --  AT4G36105
40 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.956931) with  --  DRM1
41 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.834474) with  --  AtPP2-B12; PP2-B12
42 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.821016) with  --  AT5G24480
43 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.816937) with  --  AtSWEET8; SWEET8
44 AT1G44510  --  has similar expression pattern (mutual information value=0.857023) with  --  HDG4  --  has similar expression pattern (mutual information value=0.898595) with  --  AT5G54350
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact