Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G29200
Type: Protein GRN ID: np33312 Name:
Annotation: Beta-galactosidase related protein
Gene Locus: AT4G29200
Gene Expression (Affy ATH1 probeset): 253707_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G29200  --  has similar expression pattern (mutual information value=0.91152) with  --  AT2G21930
3 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290
4 AT4G29200  --  has similar expression pattern (mutual information value=0.91152) with  --  AT2G21930  --  has similar expression pattern (mutual information value=0.821673) with  --  AT2G30680
5 AT4G29200  --  has similar expression pattern (mutual information value=0.91152) with  --  AT2G21930  --  has similar expression pattern (mutual information value=0.844006) with  --  AT1G47660
6 AT4G29200  --  has similar expression pattern (mutual information value=0.91152) with  --  AT2G21930  --  has similar expression pattern (mutual information value=0.813786) with  --  AT1G27860
7 AT4G29200  --  has similar expression pattern (mutual information value=0.91152) with  --  AT2G21930  --  has similar expression pattern (mutual information value=0.813786) with  --  AT1G28500
8 AT4G29200  --  has similar expression pattern (mutual information value=0.91152) with  --  AT2G21930  --  has similar expression pattern (mutual information value=0.858146) with  --  AT4G39753
9 AT4G29200  --  has similar expression pattern (mutual information value=0.91152) with  --  AT2G21930  --  has similar expression pattern (mutual information value=0.833622) with  --  AT5G47260
10 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.912069) with  --  AtMYB104; MYB104
11 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.918616) with  --  AT2G35590
12 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.836163) with  --  AT1G63540
13 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.807069) with  --  AT1G63200
14 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.836546) with  --  AT1G61510
15 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.836546) with  --  AT4G22450
16 AT4G29200  --  has similar expression pattern (mutual information value=0.991457) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.978586) with  --  AT1G44510
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact