Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G32660
Type: Protein GRN ID: np17138 Name:
Annotation: F-box and associated interaction domains-containing protein
Gene Locus: AT1G32660
Gene Expression (Affy ATH1 probeset): 261699_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G32660  --  has similar expression pattern (mutual information value=0.873802) with  --  AT2G15750
3 AT1G32660  --  has similar expression pattern (mutual information value=0.913473) with  --  AT4G20310
4 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT1G23930
5 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT4G09370
6 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT1G36080
7 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT5G44415
8 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT3G47330
9 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT5G37383
10 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT5G44416
11 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT3G47310
12 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT4G28970
13 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT1G23920
14 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT1G36090
15 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT4G09380
16 AT1G32660  --  has similar expression pattern (mutual information value=0.837677) with  --  CYP724A1
17 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12
18 AT1G32660  --  has similar expression pattern (mutual information value=0.941386) with  --  AT5G34900
19 AT1G32660  --  has similar expression pattern (mutual information value=0.873802) with  --  AT2G15750  --  has similar expression pattern (mutual information value=0.862523) with  --  KOM
20 AT1G32660  --  has similar expression pattern (mutual information value=0.873802) with  --  AT2G15750  --  has similar expression pattern (mutual information value=0.845097) with  --  AT1G63540
21 AT1G32660  --  has similar expression pattern (mutual information value=0.873802) with  --  AT2G15750  --  has similar expression pattern (mutual information value=0.80093) with  --  AT1G61510
22 AT1G32660  --  has similar expression pattern (mutual information value=0.873802) with  --  AT2G15750  --  has similar expression pattern (mutual information value=0.80093) with  --  AT4G22450
23 AT1G32660  --  has similar expression pattern (mutual information value=0.913473) with  --  AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260
24 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT1G23930  --  has similar expression pattern (mutual information value=0.821464) with  --  AT2G14130
25 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT1G23930  --  has similar expression pattern (mutual information value=0.821464) with  --  AT3G47260
26 AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT1G23930  --  has similar expression pattern (mutual information value=0.821464) with  --  AT3G30440
27 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT5G44416  --  has similar expression pattern (mutual information value=0.834683) with  --  AT2G07770
28 AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT5G44416  --  has similar expression pattern (mutual information value=0.834683) with  --  AT3G15600
29 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.882389) with  --  ATSUC8; SUC8
30 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903824) with  --  ATPAP19; PAP19
31 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903824) with  --  ATPAP11; PAP11
32 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903824) with  --  ATPAP5; PAP5
33 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.96452) with  --  AT2G35080
34 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903857) with  --  AT3G24250
35 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.931454) with  --  AT1G20800
36 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.992722) with  --  AT4G29250
37 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.915628) with  --  AT3G46360
38 AT1G32660  --  has similar expression pattern (mutual information value=0.900319) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.914906) with  --  ATPUP3; PUP3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact