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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G40130
Type: non-coding-other GRN ID: nn05093 Name:
Annotation: 60S ribosomal protein L5 (RPL5C), pseudogene, 60S RIBOSOMAL PROTEIN L5, Arabidopsis thaliana, SWISSPROT:RL5_ARATH; blastp match of 70% identity and 7.9e-26 P-value to GP|13359453|dbj|BAB33422.1||AB049724 putative senescence-associated protein {Pisum sativum}
Gene Locus: AT5G40130
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G40130  --  has similar expression pattern (mutual information value=0.898225) with  --  AT2G12320
3 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440
4 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710
5 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840
6 AT5G40130  --  has similar expression pattern (mutual information value=0.815171) with  --  AT3G43060
7 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.971139) with  --  AT1G61410
8 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.952807) with  --  AT4G07520
9 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.84365) with  --  CYP89A6
10 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT5G35643
11 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G34740
12 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT4G08880
13 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT5G36850
14 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT5G35000
15 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT3G24385
16 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G27780
17 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT3G33009
18 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT3G42730
19 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT2G14772
20 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT2G05562
21 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=1.24202) with  --  AT2G12210
22 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=1.24202) with  --  AT2G11060
23 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=1.24202) with  --  AT1G35280
24 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.941359) with  --  AT4G05300
25 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.903395) with  --  AT3G43530
26 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.986635) with  --  AT3G44440
27 AT5G40130  --  has similar expression pattern (mutual information value=0.824033) with  --  AT1G36440  --  has similar expression pattern (mutual information value=1.11774) with  --  AT3G46380
28 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT2G01034
29 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT5G30102
30 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT2G07660
31 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT3G42996
32 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT4G03840
33 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT3G30413
34 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT2G01026
35 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT3G29615
36 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT2G12930
37 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT5G29075
38 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT2G10780
39 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT4G16910
40 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT2G06470
41 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.17888) with  --  AT2G01024
42 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=0.956687) with  --  AT2G10920
43 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.07067) with  --  AT1G41750
44 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.1606) with  --  AT1G15830
45 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.12677) with  --  AT3G32917
46 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=0.950763) with  --  AT4G03750
47 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.20889) with  --  AT2G12685
48 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.20889) with  --  AT2G07395
49 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.20889) with  --  AT3G30465
50 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.20889) with  --  AT4G07680
51 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=0.839926) with  --  AT3G48810
52 AT5G40130  --  has similar expression pattern (mutual information value=0.848412) with  --  AT1G02710  --  has similar expression pattern (mutual information value=1.26374) with  --  ATGRP-7; ATGRP17; GRP17
53 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.821032) with  --  AT2G05820
54 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.30833) with  --  AT2G05580
55 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.18039) with  --  AT2G10020
56 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.07788) with  --  AT2G16340
57 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.13157) with  --  AT1G11690
58 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.879669) with  --  AT1G02490
59 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.20247) with  --  AT1G41770
60 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.818272) with  --  AT4G07530
61 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.80318) with  --  AT4G33610
62 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.34278) with  --  AT3G42130
63 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.28594) with  --  AT3G50540
64 AT5G40130  --  has similar expression pattern (mutual information value=0.817925) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.0536) with  --  AT5G40490
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