Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G05820
Type: non-coding-other GRN ID: nn01971 Name:
Annotation: transposable element gene
Gene Locus: AT2G05820
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690
3 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G35643
4 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT1G34740
5 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT4G08880
6 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G36850
7 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G35000
8 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT3G24385
9 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT1G27780
10 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT3G33009
11 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT3G42730
12 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G14772
13 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05562
14 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840
15 AT2G05820  --  has similar expression pattern (mutual information value=0.812579) with  --  AT1G15830
16 AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917
17 AT2G05820  --  has similar expression pattern (mutual information value=0.821936) with  --  AT3G46380
18 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.850424) with  --  AT2G07080
19 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.850424) with  --  AT1G36035
20 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.05182) with  --  AT2G10780
21 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.07682) with  --  AT1G44990
22 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.805648) with  --  AT1G02490
23 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.18072) with  --  AT2G12210
24 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.18072) with  --  AT2G11060
25 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.18072) with  --  AT1G35280
26 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.951) with  --  AT3G14510
27 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.801197) with  --  AT4G33610
28 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.984019) with  --  AT3G43060
29 AT2G05820  --  has similar expression pattern (mutual information value=0.878893) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.06574) with  --  AT3G50540
30 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G35643  --  has similar expression pattern (mutual information value=0.992615) with  --  AT2G10020
31 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440
32 AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G35643  --  is the target gene of  --  ath-miR835-5p
33 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.30833) with  --  AT2G05580
34 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G01034
35 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT5G30102
36 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G07660
37 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT3G42996
38 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT4G03840
39 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT3G30413
40 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G01026
41 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT3G29615
42 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G12930
43 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT5G29075
44 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT4G16910
45 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G06470
46 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G01024
47 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.07788) with  --  AT2G16340
48 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.915473) with  --  AT2G10920
49 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.840621) with  --  CYP89A6
50 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.60483) with  --  AT1G02710
51 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.20247) with  --  AT1G41770
52 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14615) with  --  AT1G41750
53 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.888409) with  --  AT4G03750
54 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.905121) with  --  AT4G05300
55 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT2G12685
56 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT2G07395
57 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT3G30465
58 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT4G07680
59 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.818272) with  --  AT4G07530
60 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.34278) with  --  AT3G42130
61 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.960165) with  --  AT3G44440
62 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.824205) with  --  AT3G48810
63 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.20185) with  --  ATGRP-7; ATGRP17; GRP17
64 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.817925) with  --  AT5G40130
65 AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.0536) with  --  AT5G40490
66 AT2G05820  --  has similar expression pattern (mutual information value=0.812579) with  --  AT1G15830  --  has similar expression pattern (mutual information value=0.832317) with  --  AT3G12190
67 AT2G05820  --  has similar expression pattern (mutual information value=0.812579) with  --  AT1G15830  --  has similar expression pattern (mutual information value=0.887786) with  --  AT4G24030
68 AT2G05820  --  has similar expression pattern (mutual information value=0.812579) with  --  AT1G15830  --  has similar expression pattern (mutual information value=0.80301) with  --  UGT78D3
69 AT2G05820  --  has similar expression pattern (mutual information value=0.812579) with  --  AT1G15830  --  has similar expression pattern (mutual information value=0.806922) with  --  AT4G15150
70 AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917  --  has similar expression pattern (mutual information value=0.813633) with  --  AT2G23400
71 AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917  --  has similar expression pattern (mutual information value=0.818668) with  --  AT2G16830
72 AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917  --  has similar expression pattern (mutual information value=1.06004) with  --  AT1G61410
73 AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917  --  has similar expression pattern (mutual information value=0.808193) with  --  AT3G42970
74 AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917  --  has similar expression pattern (mutual information value=0.961192) with  --  AT5G14560
75 AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917  --  is the target gene of  --  ath-miR845b
76 AT2G05820  --  has similar expression pattern (mutual information value=0.821936) with  --  AT3G46380  --  has similar expression pattern (mutual information value=0.86947) with  --  AT4G07520
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact