Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G35643
Type: non-coding-other GRN ID: nn05152 Name:
Annotation: transposable element gene
Gene Locus: AT5G35643
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G35643  --  is the target gene of  --  ath-miR835-5p
3 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820
4 AT5G35643  --  has similar expression pattern (mutual information value=0.992615) with  --  AT2G10020
5 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690
6 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440
7 AT5G35643  --  has similar expression pattern (mutual information value=0.995844) with  --  AT1G44990
8 AT5G35643  --  has similar expression pattern (mutual information value=0.990996) with  --  AT2G12210
9 AT5G35643  --  has similar expression pattern (mutual information value=0.990996) with  --  AT2G11060
10 AT5G35643  --  has similar expression pattern (mutual information value=0.990996) with  --  AT1G35280
11 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT5G36860
12 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT5G34990
13 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT4G07947
14 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT4G06572
15 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT4G05280
16 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT4G03300
17 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT3G43390
18 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT3G33010
19 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT3G32393
20 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT3G24390
21 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT3G19330
22 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  HSP70T-2
23 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT2G14770
24 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT2G05560
25 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  ATGA3OX2
26 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT1G52020
27 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT1G49560
28 AT5G35643  --  is the target gene of  --  ath-miR835-5p  --  inhibit the expression of  --  AT1G25886
29 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT1G34740
30 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT4G08880
31 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G36850
32 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT5G35000
33 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT3G24385
34 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT1G27780
35 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT3G33009
36 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT3G42730
37 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G14772
38 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05562
39 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.821032) with  --  AT1G15840
40 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.812579) with  --  AT1G15830
41 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.81447) with  --  AT3G32917
42 AT5G35643  --  has similar expression pattern (mutual information value=0.906745) with  --  AT2G05820  --  has similar expression pattern (mutual information value=0.821936) with  --  AT3G46380
43 AT5G35643  --  has similar expression pattern (mutual information value=0.992615) with  --  AT2G10020  --  has similar expression pattern (mutual information value=1.26618) with  --  AT3G42130
44 AT5G35643  --  has similar expression pattern (mutual information value=0.992615) with  --  AT2G10020  --  has similar expression pattern (mutual information value=0.992177) with  --  AT3G43060
45 AT5G35643  --  has similar expression pattern (mutual information value=0.992615) with  --  AT2G10020  --  has similar expression pattern (mutual information value=1.1355) with  --  AT5G35260
46 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.850424) with  --  AT2G07080
47 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.850424) with  --  AT1G36035
48 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.05182) with  --  AT2G10780
49 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.805648) with  --  AT1G02490
50 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.951) with  --  AT3G14510
51 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690  --  has similar expression pattern (mutual information value=0.801197) with  --  AT4G33610
52 AT5G35643  --  has similar expression pattern (mutual information value=1.094) with  --  AT1G11690  --  has similar expression pattern (mutual information value=1.06574) with  --  AT3G50540
53 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.971139) with  --  AT1G61410
54 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.952807) with  --  AT4G07520
55 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.84365) with  --  CYP89A6
56 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.941359) with  --  AT4G05300
57 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.903395) with  --  AT3G43530
58 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.986635) with  --  AT3G44440
59 AT5G35643  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.824033) with  --  AT5G40130
60 AT5G35643  --  has similar expression pattern (mutual information value=0.995844) with  --  AT1G44990  --  has similar expression pattern (mutual information value=1.10296) with  --  AT2G16340
61 AT5G35643  --  has similar expression pattern (mutual information value=0.995844) with  --  AT1G44990  --  has similar expression pattern (mutual information value=0.858512) with  --  AT3G28590
62 AT5G35643  --  has similar expression pattern (mutual information value=0.995844) with  --  AT1G44990  --  has similar expression pattern (mutual information value=0.833171) with  --  AT4G24030
63 AT5G35643  --  has similar expression pattern (mutual information value=0.990996) with  --  AT2G12210  --  has similar expression pattern (mutual information value=0.828618) with  --  SDE3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact