Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G43530
Type: non-coding-other GRN ID: nn03504 Name:
Annotation: transposable element gene
Gene Locus: AT3G43530
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490
3 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440
4 AT3G43530  --  has similar expression pattern (mutual information value=0.874302) with  --  SDE3
5 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210
6 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G11060
7 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT1G35280
8 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.850128) with  --  AT2G10780
9 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G04970
10 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT1G32830
11 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT5G34895
12 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT3G30450
13 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G15200
14 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G02200
15 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G06440
16 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.884793) with  --  AT4G28870
17 AT3G43530  --  has similar expression pattern (mutual information value=0.978434) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.884793) with  --  AT1G49680
18 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.971139) with  --  AT1G61410
19 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.952807) with  --  AT4G07520
20 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.84365) with  --  CYP89A6
21 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT5G35643
22 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G34740
23 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT4G08880
24 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT5G36850
25 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT5G35000
26 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT3G24385
27 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT1G27780
28 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT3G33009
29 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT3G42730
30 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT2G14772
31 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.992567) with  --  AT2G05562
32 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=1.26696) with  --  AT1G15840
33 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.941359) with  --  AT4G05300
34 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.986635) with  --  AT3G44440
35 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=1.11774) with  --  AT3G46380
36 AT3G43530  --  has similar expression pattern (mutual information value=0.903395) with  --  AT1G36440  --  has similar expression pattern (mutual information value=0.824033) with  --  AT5G40130
37 AT3G43530  --  has similar expression pattern (mutual information value=0.874302) with  --  SDE3  --  has similar expression pattern (mutual information value=1.04639) with  --  NF-YB11
38 AT3G43530  --  has similar expression pattern (mutual information value=0.874302) with  --  SDE3  --  has similar expression pattern (mutual information value=0.825033) with  --  AT3G27550
39 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210  --  has similar expression pattern (mutual information value=1.17341) with  --  AT2G10020
40 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210  --  has similar expression pattern (mutual information value=1.06201) with  --  AT2G16340
41 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210  --  has similar expression pattern (mutual information value=1.18072) with  --  AT1G11690
42 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210  --  has similar expression pattern (mutual information value=1.02991) with  --  AT1G44990
43 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210  --  has similar expression pattern (mutual information value=0.803045) with  --  AT1G02490
44 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210  --  has similar expression pattern (mutual information value=1.3138) with  --  AT3G42130
45 AT3G43530  --  has similar expression pattern (mutual information value=0.995995) with  --  AT2G12210  --  has similar expression pattern (mutual information value=1.16129) with  --  AT5G35260
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact