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Location:  Home > Details for node AT5G40490
Type: Protein GRN ID: np37317 Name:
Annotation: RNA-binding (RRM/RBD/RNP motifs) family protein
Gene Locus: AT5G40490
Gene Expression (Affy ATH1 probeset): 249357_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G40490  --  has similar expression pattern (mutual information value=0.825929) with  --  GTB1
3 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840
4 AT5G40490  --  has similar expression pattern (mutual information value=1.14961) with  --  AT3G50540
5 AT5G40490  --  has similar expression pattern (mutual information value=0.899152) with  --  AT5G46730
6 AT5G40490  --  has similar expression pattern (mutual information value=0.825929) with  --  GTB1  --  interacts with  --  AtIWS1
7 AT5G40490  --  has similar expression pattern (mutual information value=0.825929) with  --  GTB1  --  has similar expression pattern (mutual information value=0.908837) with  --  HB-1
8 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.821032) with  --  AT2G05820
9 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.30833) with  --  AT2G05580
10 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G01034
11 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT5G30102
12 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G07660
13 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT3G42996
14 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT4G03840
15 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT3G30413
16 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G01026
17 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT3G29615
18 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G12930
19 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT5G29075
20 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G10780
21 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT4G16910
22 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G06470
23 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.09107) with  --  AT2G01024
24 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.18039) with  --  AT2G10020
25 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.07788) with  --  AT2G16340
26 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.915473) with  --  AT2G10920
27 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.840621) with  --  CYP89A6
28 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.13157) with  --  AT1G11690
29 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.26696) with  --  AT1G36440
30 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.879669) with  --  AT1G02490
31 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.60483) with  --  AT1G02710
32 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.20247) with  --  AT1G41770
33 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14615) with  --  AT1G41750
34 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.41552) with  --  AT2G12210
35 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.41552) with  --  AT2G11060
36 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.41552) with  --  AT1G35280
37 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.25125) with  --  AT1G15830
38 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14632) with  --  AT3G32917
39 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.888409) with  --  AT4G03750
40 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.905121) with  --  AT4G05300
41 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT2G12685
42 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT2G07395
43 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT3G30465
44 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.14478) with  --  AT4G07680
45 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.818272) with  --  AT4G07530
46 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.80318) with  --  AT4G33610
47 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.34278) with  --  AT3G42130
48 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.06893) with  --  AT3G43060
49 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.960165) with  --  AT3G44440
50 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.22569) with  --  AT3G46380
51 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.824205) with  --  AT3G48810
52 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=1.20185) with  --  ATGRP-7; ATGRP17; GRP17
53 AT5G40490  --  has similar expression pattern (mutual information value=1.0536) with  --  AT1G15840  --  has similar expression pattern (mutual information value=0.817925) with  --  AT5G40130
54 AT5G40490  --  has similar expression pattern (mutual information value=1.14961) with  --  AT3G50540  --  has similar expression pattern (mutual information value=0.801951) with  --  AT2G42560
55 AT5G40490  --  has similar expression pattern (mutual information value=1.14961) with  --  AT3G50540  --  has similar expression pattern (mutual information value=1.02712) with  --  AT3G33073
56 AT5G40490  --  has similar expression pattern (mutual information value=1.14961) with  --  AT3G50540  --  has similar expression pattern (mutual information value=0.852223) with  --  AT5G25750
57 AT5G40490  --  has similar expression pattern (mutual information value=1.14961) with  --  AT3G50540  --  has similar expression pattern (mutual information value=0.833066) with  --  UGT78D3
58 AT5G40490  --  has similar expression pattern (mutual information value=1.14961) with  --  AT3G50540  --  has similar expression pattern (mutual information value=0.801143) with  --  AT4G15150
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