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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G16830
Type: non-coding-other GRN ID: nn01626 Name:
Annotation: a pseudogene whose sequence is similar to plasma membrane intrinsic protein 3 (PIP3)
Gene Locus: AT2G16830
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410
3 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780
4 AT2G16830  --  has similar expression pattern (mutual information value=0.830249) with  --  AT3G14510
5 AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917
6 AT2G16830  --  has similar expression pattern (mutual information value=0.938946) with  --  AT4G05300
7 AT2G16830  --  has similar expression pattern (mutual information value=0.901789) with  --  AT3G42120
8 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.802909) with  --  AT2G23400
9 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT2G01034
10 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT5G30102
11 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT2G07660
12 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT3G42996
13 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT4G03840
14 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT3G30413
15 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT2G01026
16 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT3G29615
17 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT2G12930
18 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT5G29075
19 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT4G16910
20 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT2G06470
21 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=1.07087) with  --  AT2G01024
22 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.971139) with  --  AT1G36440
23 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.903377) with  --  AT2G12210
24 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.903377) with  --  AT2G11060
25 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.903377) with  --  AT1G35280
26 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.891599) with  --  AT3G12190
27 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.993125) with  --  AT2G12685
28 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.993125) with  --  AT2G07395
29 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.993125) with  --  AT3G30465
30 AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410  --  has similar expression pattern (mutual information value=0.993125) with  --  AT4G07680
31 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.850128) with  --  AT2G06490
32 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.879312) with  --  AT2G10920
33 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.05182) with  --  AT1G11690
34 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.06276) with  --  AT1G64560
35 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.884663) with  --  SDE3
36 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.839317) with  --  AT1G02490
37 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.17888) with  --  AT1G02710
38 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.09107) with  --  AT1G15840
39 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.963579) with  --  AT1G15830
40 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.818992) with  --  AT4G07530
41 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.0698) with  --  AT3G50540
42 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.22875) with  --  ATGRP-7; ATGRP17; GRP17
43 AT2G16830  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G10780  --  is the target gene of  --  ath-miR774a
44 AT2G16830  --  has similar expression pattern (mutual information value=0.830249) with  --  AT3G14510  --  has similar expression pattern (mutual information value=0.817126) with  --  AT4G33610
45 AT2G16830  --  has similar expression pattern (mutual information value=0.830249) with  --  AT3G14510  --  has product (in catalytic reaction)  --  Geranylgeranyl diphosphate
46 AT2G16830  --  has similar expression pattern (mutual information value=0.830249) with  --  AT3G14510  --  has product (in catalytic reaction)  --  GGPP
47 AT2G16830  --  has similar expression pattern (mutual information value=0.830249) with  --  AT3G14510  --  has product (in catalytic reaction)  --  Geranyl diphosphate
48 AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917  --  has similar expression pattern (mutual information value=0.81447) with  --  AT2G05820
49 AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917  --  has similar expression pattern (mutual information value=1.10957) with  --  AT3G42130
50 AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917  --  has similar expression pattern (mutual information value=0.808193) with  --  AT3G42970
51 AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917  --  has similar expression pattern (mutual information value=1.05127) with  --  AT3G44440
52 AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917  --  has similar expression pattern (mutual information value=0.961192) with  --  AT5G14560
53 AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917  --  is the target gene of  --  ath-miR845b
54 AT2G16830  --  has similar expression pattern (mutual information value=0.938946) with  --  AT4G05300  --  has similar expression pattern (mutual information value=0.86268) with  --  AT4G07520
55 AT2G16830  --  has similar expression pattern (mutual information value=0.938946) with  --  AT4G05300  --  has similar expression pattern (mutual information value=0.849127) with  --  AT3G46380
56 AT2G16830  --  has similar expression pattern (mutual information value=0.938946) with  --  AT4G05300  --  has similar expression pattern (mutual information value=0.831822) with  --  AT5G36900
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