Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node COX3
Type: Protein GRN ID: np43555 Name: COX3
Annotation: COX3 | cytochrome c oxidase subunit 3 [TCDB:2.A.3.3] [TCDB:2.A.3.6]
Gene Locus: ATMG00730
Gene Expression (Affy ATH1 probeset): 263509_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 COX3  --  has similar expression pattern (mutual information value=0.845401) with  --  ATP6-2
3 COX3  --  has similar expression pattern (mutual information value=0.845401) with  --  AT2G07699
4 COX3  --  has similar expression pattern (mutual information value=0.845401) with  --  AT2G07741
5 COX3  --  has similar expression pattern (mutual information value=0.845401) with  --  ATP6; ATP6-1
6 COX3  --  has similar expression pattern (mutual information value=0.842355) with  --  COX2
7 COX3  --  transport  --  L-2,4-Diaminobutanoate
8 COX3  --  transport  --  Ornithine
9 COX3  --  transport  --  Methylamine
10 COX3  --  has similar expression pattern (mutual information value=0.845401) with  --  ATP6-2  --  has similar expression pattern (mutual information value=0.845401) with  --  AT2G07687
11 COX3  --  has similar expression pattern (mutual information value=0.845401) with  --  AT2G07741  --  transport  --  Lead
12 COX3  --  has similar expression pattern (mutual information value=0.845401) with  --  AT2G07741  --  transport  --  Sterol
13 COX3  --  has similar expression pattern (mutual information value=0.842355) with  --  COX2  --  has similar expression pattern (mutual information value=0.880912) with  --  NAD5; NAD5.3; NAD5C
14 COX3  --  has similar expression pattern (mutual information value=0.842355) with  --  COX2  --  has similar expression pattern (mutual information value=0.810935) with  --  CCB452
15 COX3  --  has similar expression pattern (mutual information value=0.842355) with  --  COX2  --  has similar expression pattern (mutual information value=0.810935) with  --  AT2G07723
16 COX3  --  has similar expression pattern (mutual information value=0.842355) with  --  COX2  --  has similar expression pattern (mutual information value=0.952727) with  --  NAD9
17 COX3  --  has similar expression pattern (mutual information value=0.842355) with  --  COX2  --  transport  --  ADP-glucose
18 COX3  --  has similar expression pattern (mutual information value=0.842355) with  --  COX2  --  is the target gene of  --  ath-miR5656
19 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  NAD2; NAD2.2; NAD2B
20 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  ORF291
21 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  NAD1; NAD1A; ND1
22 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  NAD1; NAD1B
23 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  NAD3
24 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  ABCI3; CCB256
25 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  NAD5; NAD5.2; NAD5B
26 COX3  --  transport  --  L-2,4-Diaminobutanoate  --  is transported by  --  NAD4L
27 COX3  --  transport  --  Ornithine  --  is transported by  --  pin2/AGR
28 COX3  --  transport  --  Ornithine  --  is transported by  --  ftsh4
29 COX3  --  transport  --  Ornithine  --  is transported by  --  ATXIG; XIG
30 COX3  --  transport  --  Ornithine  --  is transported by  --  PR1
31 COX3  --  transport  --  Ornithine  --  is transported by  --  AT2G07718
32 COX3  --  transport  --  Ornithine  --  is transported by  --  RIE1
33 COX3  --  transport  --  Methylamine  --  is transported by  --  NAD4
34 COX3  --  transport  --  Methylamine  --  is transported by  --  NAD1; NAD1C
35 COX3  --  transport  --  Methylamine  --  is transported by  --  NAD5; NAD5.1; NAD5A
36 COX3  --  transport  --  Methylamine  --  is transported by  --  NAD7
37 COX3  --  transport  --  Methylamine  --  is transported by  --  NAD2; NAD2.1; NAD2A
38 COX3  --  transport  --  Methylamine  --  is transported by  --  PIN7
39 COX3  --  transport  --  Methylamine  --  is transported by  --  ATSUC2; SUC2; SUT1
40 COX3  --  transport  --  Methylamine  --  is transported by  --  AT1G22570
41 COX3  --  transport  --  Methylamine  --  is transported by  --  AT1G22550
42 COX3  --  transport  --  Methylamine  --  is transported by  --  AT1G22540
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact