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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR5656
Type: non-coding-miRNA GRN ID: nn06335 Name: ath-miR5656
Annotation: Vacuolar ATPase assembly integral membrane protein VMA21-like domain
Gene Locus: AT1G05780
miRBase: Link
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR5656  --  inhibit the expression of  --  COX2
3 ath-miR5656  --  inhibit the expression of  --  AT5G60710
4 ath-miR5656  --  inhibit the expression of  --  AT5G58880
5 ath-miR5656  --  inhibit the expression of  --  AT5G56700
6 ath-miR5656  --  inhibit the expression of  --  AT5G55830
7 ath-miR5656  --  inhibit the expression of  --  MEF9
8 ath-miR5656  --  inhibit the expression of  --  COX2  --  has similar expression pattern (mutual information value=0.842355) with  --  AT2G07687
9 ath-miR5656  --  inhibit the expression of  --  COX2  --  has similar expression pattern (mutual information value=0.842355) with  --  COX3
10 ath-miR5656  --  inhibit the expression of  --  COX2  --  has similar expression pattern (mutual information value=0.880912) with  --  NAD5; NAD5.3; NAD5C
11 ath-miR5656  --  inhibit the expression of  --  COX2  --  has similar expression pattern (mutual information value=0.810935) with  --  CCB452
12 ath-miR5656  --  inhibit the expression of  --  COX2  --  has similar expression pattern (mutual information value=0.810935) with  --  AT2G07723
13 ath-miR5656  --  inhibit the expression of  --  COX2  --  has similar expression pattern (mutual information value=0.952727) with  --  NAD9
14 ath-miR5656  --  inhibit the expression of  --  COX2  --  transport  --  ADP-glucose
15 ath-miR5656  --  inhibit the expression of  --  AT5G60710  --  transport  --  Folate
16 ath-miR5656  --  inhibit the expression of  --  AT5G60710  --  transport  --  FAD
17 ath-miR5656  --  inhibit the expression of  --  MEF9  --  interacts with  --  AT1G11430
18 ath-miR5656  --  inhibit the expression of  --  MEF9  --  interacts with  --  DAL; DAL1
19 ath-miR5656  --  inhibit the expression of  --  MEF9  --  interacts with  --  AT4G20020
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