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Location:  Home > Details for node VPS60.2
Type: Protein GRN ID: np43268 Name: VPS60.2
Annotation: VPS60.2 | SNF7 family protein
Gene Locus: AT5G04850
Gene Expression (Affy ATH1 probeset): 246953_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 VPS60.2  --  interacts with  --  VPS24.1
3 VPS60.2  --  interacts with  --  ATSKD1; SKD1; VPS4
4 VPS60.2  --  interacts with  --  SNF7.1
5 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530
6 VPS60.2  --  has similar expression pattern (mutual information value=0.867373) with  --  ARI8; ATARI8
7 VPS60.2  --  has similar expression pattern (mutual information value=0.962271) with  --  AT1G55170
8 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18
9 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12
10 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535
11 VPS60.2  --  has similar expression pattern (mutual information value=0.880998) with  --  NF-YB13
12 VPS60.2  --  has similar expression pattern (mutual information value=0.832536) with  --  UBL5
13 VPS60.2  --  interacts with  --  VPS24.1  --  interacts with  --  AMSH3
14 VPS60.2  --  interacts with  --  VPS24.1  --  interacts with  --  VPS20.1
15 VPS60.2  --  interacts with  --  VPS24.1  --  interacts with  --  VPS20.2
16 VPS60.2  --  interacts with  --  VPS24.1  --  interacts with  --  SNF7.2; VPS32
17 VPS60.2  --  interacts with  --  VPS24.1  --  interacts with  --  VPS2.1
18 VPS60.2  --  interacts with  --  VPS24.1  --  has similar expression pattern (mutual information value=0.812704) with  --  AT1G61150
19 VPS60.2  --  interacts with  --  VPS24.1  --  has similar expression pattern (mutual information value=0.918988) with  --  AT5G03440
20 VPS60.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  ELC-Like
21 VPS60.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  AT4G26750
22 VPS60.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  AT4G24370
23 VPS60.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  VPS28-1; VPS28-2
24 VPS60.2  --  interacts with  --  SNF7.1  --  interacts with  --  AT4G32760
25 VPS60.2  --  interacts with  --  SNF7.1  --  interacts with  --  ATBAG4; BAG4
26 VPS60.2  --  interacts with  --  SNF7.1  --  interacts with  --  AT1G61690
27 VPS60.2  --  interacts with  --  SNF7.1  --  interacts with  --  PRA1.F3; PRA8
28 VPS60.2  --  interacts with  --  SNF7.1  --  interacts with  --  ADL1C; ADL5; DL1C; DRP1C
29 VPS60.2  --  interacts with  --  SNF7.1  --  interacts with  --  AtPPR2; EMB2750; PPR2
30 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  interacts with  --  AT5G01970
31 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.01431) with  --  SMP1
32 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.848578) with  --  AT1G09320
33 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.822208) with  --  AT1G21610
34 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.914939) with  --  ATQSOX1; QSO2; QSOX1
35 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.06558) with  --  HUB2
36 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.898852) with  --  ARFB1C; ATARFB1C
37 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.941071) with  --  ASIL2
38 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.04283) with  --  NF-YC11
39 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.877232) with  --  AT1G17930
40 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.99471) with  --  AT4G26980
41 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.13772) with  --  AT4G27120
42 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.871094) with  --  AT4G30750
43 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.871094) with  --  AT4G30730
44 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.941405) with  --  AT4G32560
45 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.933379) with  --  AME3
46 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.956687) with  --  ARI1; ATARI1
47 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.01988) with  --  AT3G53390
48 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.840441) with  --  SUA
49 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.976506) with  --  AT5G01350
50 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.914607) with  --  AT5G06780
51 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.06352) with  --  AT5G47090
52 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.824776) with  --  AT5G59140
53 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.843921) with  --  AT5G63640
54 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.840501) with  --  AT5G24870
55 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.942792) with  --  AT5G26610
56 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.931909) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
57 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.890654) with  --  AtMAPR4; MAPR4
58 VPS60.2  --  has similar expression pattern (mutual information value=1.02195) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.01756) with  --  SMU2
59 VPS60.2  --  has similar expression pattern (mutual information value=0.867373) with  --  ARI8; ATARI8  --  has similar expression pattern (mutual information value=0.821633) with  --  AT2G27285
60 VPS60.2  --  has similar expression pattern (mutual information value=0.867373) with  --  ARI8; ATARI8  --  has similar expression pattern (mutual information value=0.825759) with  --  AT1G32630
61 VPS60.2  --  has similar expression pattern (mutual information value=0.867373) with  --  ARI8; ATARI8  --  has similar expression pattern (mutual information value=0.896375) with  --  AT4G12760
62 VPS60.2  --  has similar expression pattern (mutual information value=0.867373) with  --  ARI8; ATARI8  --  interacts with  --  AHK2
63 VPS60.2  --  has similar expression pattern (mutual information value=0.962271) with  --  AT1G55170  --  has similar expression pattern (mutual information value=0.864567) with  --  AT2G29590
64 VPS60.2  --  has similar expression pattern (mutual information value=0.962271) with  --  AT1G55170  --  has similar expression pattern (mutual information value=0.801533) with  --  DRT111
65 VPS60.2  --  has similar expression pattern (mutual information value=0.962271) with  --  AT1G55170  --  has similar expression pattern (mutual information value=0.817124) with  --  ATDSS1(V); DSS1(V)
66 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  interacts with  --  AGL15
67 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  interacts with  --  AT1G75060
68 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  has similar expression pattern (mutual information value=0.810478) with  --  GIF2
69 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  has similar expression pattern (mutual information value=0.898698) with  --  AT4G11560
70 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  has similar expression pattern (mutual information value=0.813427) with  --  CYCT1;4
71 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  has similar expression pattern (mutual information value=0.847371) with  --  SIS3
72 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  has similar expression pattern (mutual information value=0.812759) with  --  AT5G15570
73 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  has similar expression pattern (mutual information value=0.869472) with  --  AT4G17620
74 VPS60.2  --  has similar expression pattern (mutual information value=0.837124) with  --  AGL18  --  has similar expression pattern (mutual information value=0.863243) with  --  FAR1
75 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  interacts with  --  NF-YC4
76 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  interacts with  --  NF-YC7
77 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.837675) with  --  BRIZ1
78 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.88124) with  --  AT2G02570
79 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.926201) with  --  AT2G24090
80 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.82284) with  --  AT1G61780
81 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.889469) with  --  AT1G64510
82 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.86817) with  --  PRPL11
83 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.942559) with  --  AT1G29070
84 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.843668) with  --  DPMS1
85 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.939639) with  --  AT3G13120
86 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.845842) with  --  EIF4B1
87 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.90665) with  --  ATSYP81; ATUFE1; SYP81; UFE1
88 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.999369) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B
89 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.884102) with  --  AT3G46930
90 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.937553) with  --  AT3G55600
91 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.831965) with  --  AT3G62220
92 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.922111) with  --  AT5G44080
93 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.817152) with  --  AT-HSFA4C; HSFA4C; RHA1
94 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.874498) with  --  HEMC
95 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.977957) with  --  AT1G25988
96 VPS60.2  --  has similar expression pattern (mutual information value=0.957657) with  --  NF-YB12  --  has similar expression pattern (mutual information value=0.977957) with  --  AT1G25682
97 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.87729) with  --  ENR1; MOD1
98 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.861571) with  --  AT2G27480
99 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.803774) with  --  AT2G20410
100 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=1.15645) with  --  CRF7
101 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.816901) with  --  AT1G77170
102 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.816901) with  --  AT1G77150
103 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.908827) with  --  VHA-A
104 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.884705) with  --  AT1G14670
105 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.902218) with  --  MBD10
106 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.812213) with  --  LTA2; PLE2
107 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.862788) with  --  AT3G24820
108 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.841411) with  --  EMB2752
109 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.942448) with  --  ATTSC13; CER10; ECR; TSC13
110 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.958139) with  --  AT3G61800
111 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.807752) with  --  AT5G04760
112 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.85909) with  --  AT5G13970
113 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.841879) with  --  AT5G14710
114 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.87676) with  --  AT5G30490
115 VPS60.2  --  has similar expression pattern (mutual information value=0.998416) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.970858) with  --  AT5G09390
116 VPS60.2  --  has similar expression pattern (mutual information value=0.880998) with  --  NF-YB13  --  has similar expression pattern (mutual information value=0.893318) with  --  AT3G07220
117 VPS60.2  --  has similar expression pattern (mutual information value=0.880998) with  --  NF-YB13  --  has similar expression pattern (mutual information value=0.893318) with  --  AT3G07260
118 VPS60.2  --  has similar expression pattern (mutual information value=0.880998) with  --  NF-YB13  --  has similar expression pattern (mutual information value=0.957337) with  --  ATGSTT2; GST10B; GSTT2
119 VPS60.2  --  has similar expression pattern (mutual information value=0.880998) with  --  NF-YB13  --  has similar expression pattern (mutual information value=0.957337) with  --  ATGSTT3; GST10C; GSTT3
120 VPS60.2  --  has similar expression pattern (mutual information value=0.880998) with  --  NF-YB13  --  has similar expression pattern (mutual information value=0.813043) with  --  AT5G42560
121 VPS60.2  --  has similar expression pattern (mutual information value=0.880998) with  --  NF-YB13  --  is the target gene of  --  ath-miR5655
122 VPS60.2  --  has similar expression pattern (mutual information value=0.832536) with  --  UBL5  --  has similar expression pattern (mutual information value=0.833944) with  --  AT2G35736
123 VPS60.2  --  has similar expression pattern (mutual information value=0.832536) with  --  UBL5  --  has similar expression pattern (mutual information value=0.825498) with  --  ATCEN2; CEN1; CEN2
124 VPS60.2  --  has similar expression pattern (mutual information value=0.832536) with  --  UBL5  --  has similar expression pattern (mutual information value=0.811652) with  --  AT5G09830
125 VPS60.2  --  has similar expression pattern (mutual information value=0.832536) with  --  UBL5  --  interacts with  --  ASIL1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

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