Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G24820
Type: Protein GRN ID: np25098 Name:
Annotation: BSD domain-containing protein
Gene Locus: AT3G24820
Gene Expression (Affy ATH1 probeset): 257601_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G24820  --  has similar expression pattern (mutual information value=0.811919) with  --  AT2G29590
3 AT3G24820  --  has similar expression pattern (mutual information value=0.942738) with  --  AT4G32560
4 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535
5 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4
6 AT3G24820  --  has similar expression pattern (mutual information value=0.811919) with  --  AT2G29590  --  has similar expression pattern (mutual information value=0.803524) with  --  AT2G25720
7 AT3G24820  --  has similar expression pattern (mutual information value=0.811919) with  --  AT2G29590  --  has similar expression pattern (mutual information value=0.872847) with  --  AT1G28540
8 AT3G24820  --  has similar expression pattern (mutual information value=0.811919) with  --  AT2G29590  --  has similar expression pattern (mutual information value=0.849157) with  --  AT1G32630
9 AT3G24820  --  has similar expression pattern (mutual information value=0.811919) with  --  AT2G29590  --  has similar expression pattern (mutual information value=0.864567) with  --  AT1G55170
10 AT3G24820  --  has similar expression pattern (mutual information value=0.811919) with  --  AT2G29590  --  has similar expression pattern (mutual information value=0.891716) with  --  ATDSS1(V); DSS1(V)
11 AT3G24820  --  has similar expression pattern (mutual information value=0.942738) with  --  AT4G32560  --  has similar expression pattern (mutual information value=0.941405) with  --  AT2G30530
12 AT3G24820  --  has similar expression pattern (mutual information value=0.942738) with  --  AT4G32560  --  has similar expression pattern (mutual information value=0.936943) with  --  AT5G26610
13 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.891999) with  --  AT2G02570
14 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.87729) with  --  ENR1; MOD1
15 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.861571) with  --  AT2G27480
16 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.803774) with  --  AT2G20410
17 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=1.15645) with  --  CRF7
18 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.816901) with  --  AT1G77170
19 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.816901) with  --  AT1G77150
20 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.908827) with  --  VHA-A
21 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.884705) with  --  AT1G14670
22 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.902218) with  --  MBD10
23 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.812213) with  --  LTA2; PLE2
24 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.868453) with  --  ASIL2
25 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=1.03) with  --  NF-YC11
26 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.989929) with  --  AT4G26980
27 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.841411) with  --  EMB2752
28 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.942448) with  --  ATTSC13; CER10; ECR; TSC13
29 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.958139) with  --  AT3G61800
30 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.932884) with  --  AT5G01350
31 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.807752) with  --  AT5G04760
32 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.968023) with  --  AT5G06780
33 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.85909) with  --  AT5G13970
34 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.841879) with  --  AT5G14710
35 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.833009) with  --  UBL5
36 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.954685) with  --  AT5G47090
37 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.998416) with  --  VPS60.2
38 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.87676) with  --  AT5G30490
39 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.970858) with  --  AT5G09390
40 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.944012) with  --  AT1G25988
41 AT3G24820  --  has similar expression pattern (mutual information value=0.862788) with  --  AT5G08535  --  has similar expression pattern (mutual information value=0.944012) with  --  AT1G25682
42 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.847082) with  --  NF-YC10
43 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.805933) with  --  AT4G07990
44 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.850517) with  --  AT3G48120
45 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.892865) with  --  AT5G54930
46 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.825573) with  --  AT5G63690
47 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.818006) with  --  AT5G15570
48 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.803669) with  --  AT1G31790
49 AT3G24820  --  has similar expression pattern (mutual information value=0.884504) with  --  AtMAPR4; MAPR4  --  has similar expression pattern (mutual information value=0.821645) with  --  FAR1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact