Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G30730
Type: Protein GRN ID: np32267 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30750.1); Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT4G30730
Gene Expression (Affy ATH1 probeset): 253596_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530
3 AT4G30730  --  has similar expression pattern (mutual information value=0.879405) with  --  AT1G23780
4 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  interacts with  --  AT5G01970
5 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.951277) with  --  AT1G61150
6 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.01431) with  --  SMP1
7 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.848578) with  --  AT1G09320
8 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.822208) with  --  AT1G21610
9 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.914939) with  --  ATQSOX1; QSO2; QSOX1
10 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.06558) with  --  HUB2
11 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.898852) with  --  ARFB1C; ATARFB1C
12 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.941071) with  --  ASIL2
13 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.04283) with  --  NF-YC11
14 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.877232) with  --  AT1G17930
15 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.99471) with  --  AT4G26980
16 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.13772) with  --  AT4G27120
17 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.871094) with  --  AT4G30750
18 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.941405) with  --  AT4G32560
19 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.933379) with  --  AME3
20 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.956687) with  --  ARI1; ATARI1
21 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.01988) with  --  AT3G53390
22 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.840441) with  --  SUA
23 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.843009) with  --  AGL18
24 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.976506) with  --  AT5G01350
25 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.914607) with  --  AT5G06780
26 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.01426) with  --  AT5G08535
27 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.06352) with  --  AT5G47090
28 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.824776) with  --  AT5G59140
29 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.843921) with  --  AT5G63640
30 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.840501) with  --  AT5G24870
31 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.02195) with  --  VPS60.2
32 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.942792) with  --  AT5G26610
33 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.931909) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
34 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=0.890654) with  --  AtMAPR4; MAPR4
35 AT4G30730  --  has similar expression pattern (mutual information value=0.871094) with  --  AT2G30530  --  has similar expression pattern (mutual information value=1.01756) with  --  SMU2
36 AT4G30730  --  has similar expression pattern (mutual information value=0.879405) with  --  AT1G23780  --  interacts with  --  ASK14; SK14
37 AT4G30730  --  has similar expression pattern (mutual information value=0.879405) with  --  AT1G23780  --  interacts with  --  ASK13; SK13
38 AT4G30730  --  has similar expression pattern (mutual information value=0.879405) with  --  AT1G23780  --  interacts with  --  ASK12; SK12
39 AT4G30730  --  has similar expression pattern (mutual information value=0.879405) with  --  AT1G23780  --  interacts with  --  ASK3; SK3
40 AT4G30730  --  has similar expression pattern (mutual information value=0.879405) with  --  AT1G23780  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G15230
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab