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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G03440
Type: Protein GRN ID: np38404 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT5G03440
Gene Expression (Affy ATH1 probeset): 250924_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G03440  --  is the target gene of  --  ath-miR779.2
3 AT5G03440  --  has similar expression pattern (mutual information value=0.978677) with  --  AT1G61780
4 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1
5 AT5G03440  --  is the target gene of  --  ath-miR779.2  --  inhibit the expression of  --  AT3G45270
6 AT5G03440  --  is the target gene of  --  ath-miR779.2  --  inhibit the expression of  --  AT3G19520
7 AT5G03440  --  is the target gene of  --  ath-miR779.2  --  inhibit the expression of  --  AT1G51300
8 AT5G03440  --  is the target gene of  --  ath-miR779.2  --  inhibit the expression of  --  ATNACK1; HIK; NACK1
9 AT5G03440  --  has similar expression pattern (mutual information value=0.978677) with  --  AT1G61780  --  has similar expression pattern (mutual information value=0.82284) with  --  NF-YB12
10 AT5G03440  --  has similar expression pattern (mutual information value=0.978677) with  --  AT1G61780  --  has similar expression pattern (mutual information value=0.812684) with  --  UBL5
11 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  interacts with  --  VPS60.2
12 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  interacts with  --  AMSH3
13 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  interacts with  --  SNF7.1
14 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  interacts with  --  VPS20.1
15 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  interacts with  --  VPS20.2
16 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  interacts with  --  SNF7.2; VPS32
17 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  interacts with  --  VPS2.1
18 AT5G03440  --  has similar expression pattern (mutual information value=0.918988) with  --  VPS24.1  --  has similar expression pattern (mutual information value=0.812704) with  --  AT1G61150
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