Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node GATA21; GNC
Type: Protein GRN ID: np39501 Name: GATA21; GNC
Annotation: GNC, GATA21 | GATA type zinc finger transcription factor family protein
Gene Locus: AT5G56860
Transcription factor /
transcriptional regulator:		 transcription factor family C2C2-GATA
Gene Expression (Affy ATH1 probeset): 247980_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 GATA21; GNC  --  interacts with  --  SNL1
3 GATA21; GNC  --  is the target gene of  --  ath-miR5658
4 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  AT4G32620
5 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  HSI2; VAL1
6 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  AT5G04390
7 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  AT5G47660
8 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  TKI1
9 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  ATTRP2; TRFL1; TRP2
10 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  ATBP-1; ATBP1; ATTBP1; HPPBF-1; TBP1
11 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  ALY3; ATALY3
12 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  ALY2; ATALY2
13 GATA21; GNC  --  interacts with  --  SNL1  --  interacts with  --  ATHD1; ATHDA19; HD1; HDA1; HDA19; RPD3A
14 GATA21; GNC  --  interacts with  --  SNL1  --  has similar expression pattern (mutual information value=0.804784) with  --  AT3G25840
15 GATA21; GNC  --  interacts with  --  SNL1  --  has similar expression pattern (mutual information value=0.904758) with  --  ATSMC1; SMC1; TTN8
16 GATA21; GNC  --  interacts with  --  SNL1  --  has similar expression pattern (mutual information value=0.85556) with  --  ASG2
17 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G61510
18 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  BIR1
19 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G40630
20 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G03340
21 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT4G39840
22 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT4G39420
23 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  RHS16
24 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT3G59020
25 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT3G23270
26 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATTIM17-2; TIM17; TIM17-2
27 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT2G36460
28 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT2G21530
29 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATMKK9
30 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5
31 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATEXO70G2; EXO70G2
32 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT1G32360
33 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT1G29540
34 GATA21; GNC  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  chr31
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact