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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G03340
Type: Protein GRN ID: np39046 Name:
Annotation: ATPase, AAA-type, CDC48 protein
Gene Locus: AT5G03340
Gene Expression (Affy ATH1 probeset): 250899_at    
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G03340  --  is the target gene of  --  ath-miR5658
3 AT5G03340  --  has similar expression pattern (mutual information value=0.865997) with  --  EMB3011
4 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G61510
5 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  GATA21; GNC
6 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  BIR1
7 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G40630
8 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT4G39840
9 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT4G39420
10 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  RHS16
11 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT3G59020
12 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT3G23270
13 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATTIM17-2; TIM17; TIM17-2
14 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT2G36460
15 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT2G21530
16 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATMKK9
17 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5
18 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATEXO70G2; EXO70G2
19 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT1G32360
20 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT1G29540
21 AT5G03340  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  chr31
22 AT5G03340  --  has similar expression pattern (mutual information value=0.865997) with  --  EMB3011  --  has similar expression pattern (mutual information value=0.813508) with  --  AT5G16680
23 AT5G03340  --  has similar expression pattern (mutual information value=0.865997) with  --  EMB3011  --  has similar expression pattern (mutual information value=0.838797) with  --  TAF4; TAF4B
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