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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATSMC1; SMC1; TTN8
Type: Protein GRN ID: np30541 Name: ATSMC1; SMC1; TTN8
Annotation: TTN8, SMC1, ATSMC1 | Structural maintenance of chromosomes (SMC) family protein
Gene Locus: AT3G54670
Gene Expression (Affy ATH1 probeset): 251851_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1
3 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.90155) with  --  AtUBP13; UBP13
4 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=1.00316) with  --  AT5G07980
5 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=1.00316) with  --  AT5G07940
6 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  AT4G32620
7 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  HSI2; VAL1
8 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  AT5G04390
9 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  AT5G47660
10 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  TKI1
11 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  ATTRP2; TRFL1; TRP2
12 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  ATBP-1; ATBP1; ATTBP1; HPPBF-1; TBP1
13 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  GATA21; GNC
14 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  ALY3; ATALY3
15 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  ALY2; ATALY2
16 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  interacts with  --  ATHD1; ATHDA19; HD1; HDA1; HDA19; RPD3A
17 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  has similar expression pattern (mutual information value=0.804784) with  --  AT3G25840
18 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.904758) with  --  SNL1  --  has similar expression pattern (mutual information value=0.85556) with  --  ASG2
19 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.90155) with  --  AtUBP13; UBP13  --  has product (in catalytic reaction)  --  Thiol
20 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=0.90155) with  --  AtUBP13; UBP13  --  has similar expression pattern (mutual information value=0.844138) with  --  AT3G26560
21 ATSMC1; SMC1; TTN8  --  has similar expression pattern (mutual information value=1.00316) with  --  AT5G07980  --  has similar expression pattern (mutual information value=0.815374) with  --  AT3G09670
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