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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G39840
Type: Protein GRN ID: np33867 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to 6096 proteins in 607 species: Archae - 22; Bacteria - 3243; Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128; Other Eukaryotes - 10455 (source: NCBI BLink).
Gene Locus: AT4G39840
Gene Expression (Affy ATH1 probeset): 252866_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G39840  --  is the target gene of  --  ath-miR5658
3 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G61510
4 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  GATA21; GNC
5 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  BIR1
6 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G40630
7 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT5G03340
8 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT4G39420
9 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  RHS16
10 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT3G59020
11 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT3G23270
12 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATTIM17-2; TIM17; TIM17-2
13 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT2G36460
14 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT2G21530
15 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATMKK9
16 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5
17 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  ATEXO70G2; EXO70G2
18 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT1G32360
19 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  AT1G29540
20 AT4G39840  --  is the target gene of  --  ath-miR5658  --  inhibit the expression of  --  chr31
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