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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR5658
Type: non-coding-miRNA GRN ID: nn06337 Name: ath-miR5658
Annotation: Potential natural antisense gene, locus overlaps with AT4G39840
Gene Locus: AT4G39838
miRBase: Link
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR5658  --  inhibit the expression of  --  AT5G61510
3 ath-miR5658  --  inhibit the expression of  --  GATA21; GNC
4 ath-miR5658  --  inhibit the expression of  --  BIR1
5 ath-miR5658  --  inhibit the expression of  --  AT5G40630
6 ath-miR5658  --  inhibit the expression of  --  AT5G03340
7 ath-miR5658  --  inhibit the expression of  --  AT4G39840
8 ath-miR5658  --  inhibit the expression of  --  AT4G39420
9 ath-miR5658  --  inhibit the expression of  --  RHS16
10 ath-miR5658  --  inhibit the expression of  --  AT3G59020
11 ath-miR5658  --  inhibit the expression of  --  AT3G23270
12 ath-miR5658  --  inhibit the expression of  --  ATTIM17-2; TIM17; TIM17-2
13 ath-miR5658  --  inhibit the expression of  --  AT2G36460
14 ath-miR5658  --  inhibit the expression of  --  AT2G21530
15 ath-miR5658  --  inhibit the expression of  --  ATMKK9
16 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5
17 ath-miR5658  --  inhibit the expression of  --  ATEXO70G2; EXO70G2
18 ath-miR5658  --  inhibit the expression of  --  AT1G32360
19 ath-miR5658  --  inhibit the expression of  --  AT1G29540
20 ath-miR5658  --  inhibit the expression of  --  chr31
21 ath-miR5658  --  inhibit the expression of  --  AT5G61510  --  has product (in catalytic reaction)  --  Semiquinone
22 ath-miR5658  --  inhibit the expression of  --  GATA21; GNC  --  interacts with  --  SNL1
23 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT1G27290
24 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT2G16030
25 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  RUS3
26 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT3G26370
27 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATMAPR3; ATMP2; MAPR3; MSBP2
28 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT5G07340
29 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATH3; ATTRX3; ATTRXH3; TRX3; TRXH3
30 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATDHAR1; DHAR1; DHAR5
31 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  DAU2
32 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT4G12950
33 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATMLO2; MLO2; PMR2
34 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT2G28960
35 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT5G63930
36 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT3G28040
37 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  TET11
38 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT4G14480
39 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT5G10290
40 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  LRR1
41 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATPRK2A; PRK2A
42 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  BON3
43 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  BON; BON1; CPN1
44 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATPUP8; PUP8
45 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATSERK2; SERK2
46 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  CLI1; RPK2; TOAD2
47 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT2G41820
48 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  SCM; SRF9; SUB
49 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  ATPLC2; PLC2
50 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT2G01210
51 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  AT2G16250
52 ath-miR5658  --  inhibit the expression of  --  BIR1  --  interacts with  --  BAK1
53 ath-miR5658  --  inhibit the expression of  --  BIR1  --  modify  --  BRI1/BIN1
54 ath-miR5658  --  inhibit the expression of  --  AT5G03340  --  has similar expression pattern (mutual information value=0.865997) with  --  EMB3011
55 ath-miR5658  --  inhibit the expression of  --  ATTIM17-2; TIM17; TIM17-2  --  interacts with  --  ATTIM23-2; TIM23-2
56 ath-miR5658  --  inhibit the expression of  --  ATTIM17-2; TIM17; TIM17-2  --  transport  --  Polypeptide
57 ath-miR5658  --  inhibit the expression of  --  AT2G36460  --  interacts with  --  GAPC; GAPC-1; GAPC1
58 ath-miR5658  --  inhibit the expression of  --  AT2G36460  --  interacts with  --  ATVDAC3; VDAC3
59 ath-miR5658  --  inhibit the expression of  --  AT2G36460  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate
60 ath-miR5658  --  inhibit the expression of  --  AT2G36460  --  has product (in catalytic reaction)  --  Glycerone phosphate
61 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  interacts with  --  Family89, coding gene
62 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  interacts with  --  PTF1; TCP13; TFPD
63 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  interacts with  --  AtSS2; SS2
64 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  interacts with  --  AtPPa5; PPa5
65 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  interacts with  --  CTR1
66 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  interacts with  --  ICME-LIKE2
67 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  modify  --  ATMPK20; MPK20
68 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  modify  --  ATMPK12; MAPK12; MPK12
69 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  modify  --  ATMPK11; MPK11
70 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  modify  --  EIN3
71 ath-miR5658  --  inhibit the expression of  --  ATMKK9  --  is a member of  --  Family90, coding gene
72 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  interacts with  --  CHR3; SYD
73 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  interacts with  --  ATSWI3B?
74 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169n
75 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169m
76 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169l
77 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169k
78 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169j
79 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169i
80 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169h
81 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169c
82 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169b
83 ath-miR5658  --  inhibit the expression of  --  NF-YA5; NFYA5  --  is the target gene of  --  ath-miR169a
84 ath-miR5658  --  inhibit the expression of  --  AT1G32360  --  interacts with  --  AT2G04080
85 ath-miR5658  --  inhibit the expression of  --  chr31  --  is the target gene of  --  ath-miR5998b
86 ath-miR5658  --  inhibit the expression of  --  chr31  --  is the target gene of  --  ath-miR5998a
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