Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G33730
Type: Protein GRN ID: np32453 Name:
Annotation: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein [TCDB:3.A.5.8] [TCDB:3.A.5.9]
Gene Locus: AT4G33730
Gene Expression (Affy ATH1 probeset): 253353_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3
3 AT4G33730  --  has similar expression pattern (mutual information value=0.908725) with  --  RHS18
4 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=0.983524) with  --  AT5G06630
5 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=0.983524) with  --  AT2G24980
6 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=0.854826) with  --  FLA6
7 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=0.803579) with  --  AT3G06390
8 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=0.964436) with  --  AT4G30670
9 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=1.24463) with  --  ATPRP3; PRP3
10 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=1.16047) with  --  AT5G49080
11 AT4G33730  --  has similar expression pattern (mutual information value=0.997229) with  --  AGP3  --  has similar expression pattern (mutual information value=1.00031) with  --  AT5G19800
12 AT4G33730  --  has similar expression pattern (mutual information value=0.908725) with  --  RHS18  --  has similar expression pattern (mutual information value=0.926911) with  --  AT4G25790
13 AT4G33730  --  has similar expression pattern (mutual information value=0.908725) with  --  RHS18  --  has similar expression pattern (mutual information value=0.914396) with  --  AT5G05500
14 AT4G33730  --  has similar expression pattern (mutual information value=0.908725) with  --  RHS18  --  has similar expression pattern (mutual information value=1.04704) with  --  AtXTH13; XTH13
15 AT4G33730  --  has similar expression pattern (mutual information value=0.908725) with  --  RHS18  --  has similar expression pattern (mutual information value=1.02981) with  --  AtXTH12; XTH12
16 AT4G33730  --  has similar expression pattern (mutual information value=0.908725) with  --  RHS18  --  has similar expression pattern (mutual information value=0.973925) with  --  RHS19
17 AT4G33730  --  has similar expression pattern (mutual information value=0.908725) with  --  RHS18  --  has similar expression pattern (mutual information value=0.999512) with  --  AT5G35190
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact