Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G62890
Type: Protein GRN ID: np38519 Name:
Annotation: Xanthine/uracil permease family protein [TCDB:2.A.29.1] [TCDB:2.A.29.10] [TCDB:2.A.29.11] [TCDB:2.A.29.12] [TCDB:2.A.29.14] [TCDB:2.A.29.16] [TCDB:2.A.29.17] [TCDB:2.A.29.2] [TCDB:2.A.29.22] [TCDB:2.A.29.23] [TCDB:2.A.29.27]
Gene Locus: AT5G62890
Gene Expression (Affy ATH1 probeset): 247404_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G62890  --  interacts with  --  FAB2; SSI2
3 AT5G62890  --  transport  --  Folate
4 AT5G62890  --  transport  --  FAD
5 AT5G62890  --  interacts with  --  FAB2; SSI2  --  interacts with  --  PDF1.2;LCR77
6 AT5G62890  --  interacts with  --  FAB2; SSI2  --  interacts with  --  AT5G14020
7 AT5G62890  --  interacts with  --  FAB2; SSI2  --  interacts with  --  BR6OX2
8 AT5G62890  --  interacts with  --  FAB2; SSI2  --  interacts with  --  EDS1
9 AT5G62890  --  interacts with  --  FAB2; SSI2  --  interacts with  --  PAD4
10 AT5G62890  --  interacts with  --  FAB2; SSI2  --  has product (in catalytic reaction)  --  Acceptor
11 AT5G62890  --  interacts with  --  FAB2; SSI2  --  has product (in catalytic reaction)  --  Oleoyl-[acyl-carrier protein]
12 AT5G62890  --  interacts with  --  FAB2; SSI2  --  has similar expression pattern (mutual information value=0.812951) with  --  NAGK
13 AT5G62890  --  interacts with  --  FAB2; SSI2  --  has similar expression pattern (mutual information value=0.814561) with  --  DiT1
14 AT5G62890  --  interacts with  --  FAB2; SSI2  --  has similar expression pattern (mutual information value=0.816756) with  --  ASN2
15 AT5G62890  --  transport  --  Folate  --  is transported by  --  NAD5; NAD5.3; NAD5C
16 AT5G62890  --  transport  --  Folate  --  is transported by  --  NDHH
17 AT5G62890  --  transport  --  Folate  --  is transported by  --  ATNRAMP4; NRAMP4
18 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT5G64970
19 AT5G62890  --  transport  --  Folate  --  is transported by  --  ABCF5; ATGCN5; GCN5
20 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT5G64700
21 AT5G62890  --  transport  --  Folate  --  is transported by  --  ABCA9; ATATH11; ATH11
22 AT5G62890  --  transport  --  Folate  --  is transported by  --  ABCG28
23 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT5G60710
24 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT5G59740
25 AT5G62890  --  transport  --  Folate  --  is transported by  --  ATUCP2; UCP2
26 AT5G62890  --  transport  --  Folate  --  is transported by  --  AHA3; ATAHA3; HA3
27 AT5G62890  --  transport  --  Folate  --  is transported by  --  ACA8; AT-ACA8
28 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT4G01440
29 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G79990
30 AT5G62890  --  transport  --  Folate  --  is transported by  --  ATERDJ2A
31 AT5G62890  --  transport  --  Folate  --  is transported by  --  GASA1
32 AT5G62890  --  transport  --  Folate  --  is transported by  --  AVA-P4
33 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G71940
34 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G70740
35 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G65090
36 AT5G62890  --  transport  --  Folate  --  is transported by  --  UBC28
37 AT5G62890  --  transport  --  Folate  --  is transported by  --  DAA1
38 AT5G62890  --  transport  --  Folate  --  is transported by  --  DAL1
39 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G61390
40 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G48980
41 AT5G62890  --  transport  --  Folate  --  is transported by  --  PEX3; PEX3-2
42 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G29820
43 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G28630
44 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G25500
45 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G19650
46 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G15120
47 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G14480
48 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G11330
49 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G11180
50 AT5G62890  --  transport  --  Folate  --  is transported by  --  AT1G07650
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact