Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node DEL3; E2FF; E2L2
Type: Protein GRN ID: np28049 Name: DEL3; E2FF; E2L2
Annotation: DEL3, E2L2, E2FF | DP-E2F-like protein 3
Gene Locus: AT3G01330
Transcription factor /
transcriptional regulator:		 transcription factor family E2F-DP
Gene Expression (Affy ATH1 probeset): 257524_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1
3 DEL3; E2FF; E2L2  --  interacts with  --  CYCD3;2
4 DEL3; E2FF; E2L2  --  regulates the expression of   --  FAS1; NFB2
5 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300
6 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  ICK5; ICN6; KRP7
7 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CYCH;1
8 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CYCD4;2
9 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CYCD4;1
10 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CYCA3;4
11 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CKS2
12 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CKS1; CKS1AT
13 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT1G67580
14 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT2G21237
15 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT4G16444
16 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AKIN11; ATKIN11; KIN11; SNRK1.2
17 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT;CDCKD;3; CAK2AT; CDKD1;3
18 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  ACK2; ICK7; KRP4; KRP4
19 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  ICK1; KRP1
20 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  ATDPB; DPB
21 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  DPA
22 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  DEL2; E2FD; E2L1
23 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  DEL1; E2FE; E2L3
24 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CYCD5;1
25 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CDKB2;2
26 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2
27 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT;CDKD;1; CAK3AT; CDKD1;1
28 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CDKB2;1
29 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CDKB1;2
30 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  CDC2B; CDKB1;1
31 DEL3; E2FF; E2L2  --  interacts with  --  CAK1AT; CDKF;1  --  modify  --  MED22B
32 DEL3; E2FF; E2L2  --  interacts with  --  CYCD3;2  --  interacts with  --  CYCB2;3
33 DEL3; E2FF; E2L2  --  interacts with  --  CYCD3;2  --  interacts with  --  CYCA2;1
34 DEL3; E2FF; E2L2  --  interacts with  --  CYCD3;2  --  interacts with  --  ARR1 family72, response regulator and putative novel transcription factor gene
35 DEL3; E2FF; E2L2  --  interacts with  --  CYCD3;2  --  interacts with  --  ICK6; KRP3
36 DEL3; E2FF; E2L2  --  interacts with  --  CYCD3;2  --  interacts with  --  ICK2; KRP2
37 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.817998) with  --  AT2G36200
38 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.910952) with  --  POK1
39 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.853017) with  --  AT3G44050
40 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.89668) with  --  AT3G54630
41 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.983158) with  --  AT5G07810
42 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.816554) with  --  AILP1; ATAILP1
43 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.884269) with  --  AT5G27330
44 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.864016) with  --  AT5G13520
45 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=1.01623) with  --  AT4G15890
46 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.813476) with  --  KINESIN-12A; PAKRP1
47 DEL3; E2FF; E2L2  --  has similar expression pattern (mutual information value=0.830882) with  --  AT5G33300  --  is the target gene of  --  ath-miR1886.2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact