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Location:  Home > Details for node AT4G28025
Type: Protein GRN ID: np31609 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT4G28025
Gene Expression (Affy ATH1 probeset): 253825_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960
3 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700
4 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065
5 AT4G28025  --  has similar expression pattern (mutual information value=0.842359) with  --  ACA3; ATECA1; ECA1
6 AT4G28025  --  has similar expression pattern (mutual information value=0.891687) with  --  AT2G41780
7 AT4G28025  --  has similar expression pattern (mutual information value=1.02407) with  --  AT1G78140
8 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140
9 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2
10 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630
11 AT4G28025  --  has similar expression pattern (mutual information value=1.2849) with  --  CcdA
12 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530
13 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.30343) with  --  AT2G26340
14 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.30279) with  --  AT2G30170
15 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.803121) with  --  AT2G39300
16 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.07772) with  --  AT2G46910
17 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.895841) with  --  ALB3
18 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.24646) with  --  PSB27
19 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.16364) with  --  ATGPX1; GPX1
20 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.08837) with  --  AT1G19740
21 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.27107) with  --  AT1G02475
22 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.09965) with  --  ATMSRB1; MSRB1
23 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.19554) with  --  AT1G76730
24 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.38195) with  --  TAPX
25 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.35813) with  --  PIFI
26 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.37887) with  --  AT3G23700
27 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.863813) with  --  AT3G10970
28 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.32746) with  --  AT1G20810
29 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.35041) with  --  OHP2
30 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.997304) with  --  ATNSI; NSI
31 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.27506) with  --  PGR5-LIKE A
32 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.802069) with  --  AT4G26555
33 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.28139) with  --  AT4G31530
34 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.991356) with  --  ATSSL4; SSL4
35 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.56725) with  --  AT3G56650
36 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.937707) with  --  ATCCD1; ATNCED1; CCD1; NCED1
37 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.22845) with  --  AT5G03880
38 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.27934) with  --  HCF136
39 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.26976) with  --  AT5G48790
40 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.26634) with  --  crr1
41 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.40288) with  --  AT5G53490
42 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.25222) with  --  EMB2728; RPE
43 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=0.978487) with  --  HCF164
44 AT4G28025  --  has similar expression pattern (mutual information value=1.192) with  --  AT2G21960  --  has similar expression pattern (mutual information value=1.38877) with  --  AT1G67700
45 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.31913) with  --  EDA3
46 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.2352) with  --  PTAC4; VIPP1
47 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.22374) with  --  CRB; CSP41B; HIP1.3
48 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.26557) with  --  AT2G36145
49 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.41125) with  --  AT2G05310
50 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.41125) with  --  AT4G13500
51 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.02827) with  --  AT1G49380
52 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=0.90838) with  --  AT1G07440
53 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.3767) with  --  AT1G76450
54 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.10872) with  --  ATGER1; GER1; GLP1
55 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.22553) with  --  ATPPT2; PPT2
56 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.25775) with  --  AT4G02530
57 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.11349) with  --  AOP2
58 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.25352) with  --  AT4G39970
59 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.2572) with  --  AT3G45050
60 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.11033) with  --  ATMYB29; MYB29; PMG2
61 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.35037) with  --  AT5G37360
62 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.297) with  --  APE1
63 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.21122) with  --  ATFKBP13; FKBP13
64 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=0.963276) with  --  AT5G62260
65 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has similar expression pattern (mutual information value=1.0422) with  --  ACD6
66 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has product (in catalytic reaction)  --  Thioredoxin
67 AT4G28025  --  has similar expression pattern (mutual information value=1.15517) with  --  AT2G04700  --  has product (in catalytic reaction)  --  Oxidized ferredoxin
68 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=0.942312) with  --  NPG1
69 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=1.02469) with  --  ATCPISCA; CPISCA
70 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=1.30028) with  --  CLPR1; NCLPP5; SVR2
71 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=1.1264) with  --  AT3G01920
72 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=0.882436) with  --  AT4G27390
73 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=0.962694) with  --  PPH1; TAP38
74 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=0.881272) with  --  AT4G38225
75 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=0.846723) with  --  PGL34
76 AT4G28025  --  has similar expression pattern (mutual information value=1.21133) with  --  AT1G21065  --  has similar expression pattern (mutual information value=1.05824) with  --  AT5G11840
77 AT4G28025  --  has similar expression pattern (mutual information value=0.842359) with  --  ACA3; ATECA1; ECA1  --  interacts with  --  GLT1; PGLCT
78 AT4G28025  --  has similar expression pattern (mutual information value=0.842359) with  --  ACA3; ATECA1; ECA1  --  interacts with  --  ATGDU2; GDU2
79 AT4G28025  --  has similar expression pattern (mutual information value=0.891687) with  --  AT2G41780  --  has similar expression pattern (mutual information value=0.816496) with  --  AT1G36060
80 AT4G28025  --  has similar expression pattern (mutual information value=0.891687) with  --  AT2G41780  --  has similar expression pattern (mutual information value=0.925289) with  --  AT1G53180
81 AT4G28025  --  has similar expression pattern (mutual information value=0.891687) with  --  AT2G41780  --  has similar expression pattern (mutual information value=0.802223) with  --  AT2G21850
82 AT4G28025  --  has similar expression pattern (mutual information value=1.02407) with  --  AT1G78140  --  interacts with  --  AT3G18570
83 AT4G28025  --  has similar expression pattern (mutual information value=1.02407) with  --  AT1G78140  --  interacts with  --  AT4G25660
84 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.805973) with  --  CYP76C1
85 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.20218) with  --  AT1G77090
86 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.911737) with  --  AT1G36320
87 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.15457) with  --  AT1G29700
88 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.944474) with  --  AT3G18500
89 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.01281) with  --  AT4G13200
90 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.10783) with  --  AT5G65840
91 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  transport  --  UDP-N-acetyl-D-galactosamine
92 AT4G28025  --  has similar expression pattern (mutual information value=1.18271) with  --  AT1G28140  --  transport  --  UDP-glucuronate
93 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=1.21939) with  --  AT2G35410
94 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.831294) with  --  AtIDD5; IDD5
95 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=1.10971) with  --  SCY1
96 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.840808) with  --  AT2G25510
97 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.983848) with  --  TCP3
98 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=1.21813) with  --  ATHM4; ATM4; TRX-M4
99 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.927554) with  --  AT1G18170
100 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.81118) with  --  AT4G00030
101 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.848344) with  --  AT3G45260
102 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.891888) with  --  AT3G63160
103 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.932335) with  --  AT5G20935
104 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  has similar expression pattern (mutual information value=0.828394) with  --  ATSYTD; NTMC2T2.2; NTMC2TYPE2.2; SYT4; SYTD
105 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  interacts with  --  ATMYB3; MYB3
106 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  interacts with  --  G6PD1
107 AT4G28025  --  has similar expression pattern (mutual information value=1.04038) with  --  ATHM2  --  interacts with  --  G6PD4
108 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.12536) with  --  PSBW
109 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.16309) with  --  AT1G52220
110 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.32128) with  --  AT3G10060
111 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.21738) with  --  AT3G51510
112 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630  --  has similar expression pattern (mutual information value=0.895368) with  --  CIPK20/CIPK15
113 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.26977) with  --  AT1G32160
114 AT4G28025  --  has similar expression pattern (mutual information value=1.27078) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.26858) with  --  ATLDA; ATPU1; LDA; PU1
115 AT4G28025  --  has similar expression pattern (mutual information value=1.2849) with  --  CcdA  --  has similar expression pattern (mutual information value=1.09339) with  --  AT1G06690
116 AT4G28025  --  has similar expression pattern (mutual information value=1.2849) with  --  CcdA  --  has similar expression pattern (mutual information value=1.0822) with  --  AT3G02690
117 AT4G28025  --  has similar expression pattern (mutual information value=1.2849) with  --  CcdA  --  has similar expression pattern (mutual information value=0.851165) with  --  AT4G10000
118 AT4G28025  --  has similar expression pattern (mutual information value=1.2849) with  --  CcdA  --  has similar expression pattern (mutual information value=1.02134) with  --  AT3G43540
119 AT4G28025  --  has similar expression pattern (mutual information value=1.2849) with  --  CcdA  --  has similar expression pattern (mutual information value=0.890442) with  --  ABCB29; ATATH12; ATH12
120 AT4G28025  --  has similar expression pattern (mutual information value=1.2849) with  --  CcdA  --  has similar expression pattern (mutual information value=1.14369) with  --  AT5G08650
121 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  interacts with  --  AT4G00355
122 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.983995) with  --  Carotenoid biosynthesis
123 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.06719) with  --  AT1G05140
124 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.02351) with  --  LPA1
125 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.952452) with  --  AT1G14270
126 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.910338) with  --  AT3G25805
127 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G13150
128 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.04603) with  --  AT4G28740
129 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.11988) with  --  AT4G29590
130 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.05549) with  --  AT4G33500
131 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.810726) with  --  DHS2
132 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.12813) with  --  AT3G61080
133 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.82873) with  --  SQE5; SQP1
134 AT4G28025  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.20967) with  --  AT5G38510
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