Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node VPS2.2
Type: Protein GRN ID: np35891 Name: VPS2.2
Annotation: VPS2.2 | SNF7 family protein
Gene Locus: AT5G44560
Gene Expression (Affy ATH1 probeset): 249060_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4
3 VPS2.2  --  interacts with  --  VPS2.1
4 VPS2.2  --  interacts with  --  CHMP1B; VPS46.1
5 VPS2.2  --  interacts with  --  SNF7.1
6 VPS2.2  --  interacts with  --  VPS25
7 VPS2.2  --  interacts with  --  VPS28-1
8 VPS2.2  --  interacts with  --  CHMP1A; VPS46.2
9 VPS2.2  --  interacts with  --  SNF7.2; VPS32
10 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  VPS60.2
11 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  VPS20.1
12 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  VPS20.2
13 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  ELC-Like
14 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  ATELC; ELC
15 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  AT4G26750
16 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  AT4G24370
17 VPS2.2  --  interacts with  --  ATSKD1; SKD1; VPS4  --  interacts with  --  VPS28-1; VPS28-2
18 VPS2.2  --  interacts with  --  VPS2.1  --  interacts with  --  AMSH1
19 VPS2.2  --  interacts with  --  VPS2.1  --  interacts with  --  AMSH3
20 VPS2.2  --  interacts with  --  VPS2.1  --  interacts with  --  AT5G04920
21 VPS2.2  --  interacts with  --  VPS2.1  --  interacts with  --  VPS37-1
22 VPS2.2  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.908881) with  --  OBE1
23 VPS2.2  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.823499) with  --  AT3G01430
24 VPS2.2  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.813189) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B
25 VPS2.2  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.880676) with  --  ATEXO70B1; EXO70B1
26 VPS2.2  --  interacts with  --  SNF7.1  --  interacts with  --  AT4G32760
27 VPS2.2  --  interacts with  --  SNF7.1  --  interacts with  --  ATBAG4; BAG4
28 VPS2.2  --  interacts with  --  SNF7.1  --  interacts with  --  AT1G61690
29 VPS2.2  --  interacts with  --  SNF7.1  --  interacts with  --  PRA1.F3; PRA8
30 VPS2.2  --  interacts with  --  SNF7.1  --  interacts with  --  ADL1C; ADL5; DL1C; DRP1C
31 VPS2.2  --  interacts with  --  SNF7.1  --  interacts with  --  AtPPR2; EMB2750; PPR2
32 VPS2.2  --  interacts with  --  VPS25  --  interacts with  --  VPS22
33 VPS2.2  --  interacts with  --  VPS28-1  --  interacts with  --  AT4G37130
34 VPS2.2  --  interacts with  --  VPS28-1  --  interacts with  --  AT2G38830
35 VPS2.2  --  interacts with  --  CHMP1A; VPS46.2  --  interacts with  --  AT1G09230
36 VPS2.2  --  interacts with  --  SNF7.2; VPS32  --  interacts with  --  ATCFIM-25; CFIM-25
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact