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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G60230
Type: Protein GRN ID: np16847 Name:
Annotation: Radical SAM superfamily protein
Gene Locus: AT1G60230
Gene Expression (Affy ATH1 probeset): 264222_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490
3 AT1G60230  --  has similar expression pattern (mutual information value=0.81825) with  --  HINT 2
4 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670
5 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450
6 AT1G60230  --  has similar expression pattern (mutual information value=0.926189) with  --  SVR3
7 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2
8 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.3498) with  --  EDA3
9 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.00556) with  --  AT2G26900
10 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.25189) with  --  AT2G35410
11 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.28378) with  --  GDCH
12 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.30829) with  --  AT2G27680
13 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.26882) with  --  PSB29; THF1
14 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.39272) with  --  FBA1
15 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.25777) with  --  ATSULA; GC1; SULA
16 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.07569) with  --  IMPL1
17 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.963488) with  --  AT2G17033
18 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.02987) with  --  AtTic55; Tic55; TIC55-II
19 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.27205) with  --  AT2G36145
20 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.14982) with  --  AT1G64150
21 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.14831) with  --  APG2; PGA2; TATC; UNE3
22 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.26786) with  --  ISPF; MECPS
23 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.24223) with  --  AT1G29700
24 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.3621) with  --  AT3G10060
25 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.42565) with  --  ATF1; TRXF1
26 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.29255) with  --  Deg1; DEGP1
27 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.33638) with  --  AT3G15110
28 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.924715) with  --  ATSS4; SS4; SSIV
29 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.31211) with  --  AT4G22830
30 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.997778) with  --  MRL1; PDE346
31 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.34875) with  --  HCEF1
32 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.33573) with  --  PPL1
33 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.38377) with  --  AT3G56650
34 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.34758) with  --  AT5G07020
35 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.947588) with  --  ATSS1; SS1; SSI; SSI1
36 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.25305) with  --  AT5G51110
37 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.993406) with  --  HCF106
38 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.10767) with  --  THI1; THI4; TZ
39 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.04573) with  --  ACD2; ATRCCR
40 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.28239) with  --  AT5G20140
41 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.847172) with  --  AT5G19540
42 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.32158) with  --  AT1G32160
43 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.01753) with  --  NDC1
44 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.27783) with  --  ATLDA; ATPU1; LDA; PU1
45 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.20733) with  --  AT4G17560
46 AT1G60230  --  has similar expression pattern (mutual information value=0.854903) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.913424) with  --  HISN5B
47 AT1G60230  --  has similar expression pattern (mutual information value=0.81825) with  --  HINT 2  --  interacts with  --  ATHSP23.6-MITO; HSP23.6-MITO
48 AT1G60230  --  has similar expression pattern (mutual information value=0.81825) with  --  HINT 2  --  interacts with  --  AT1G07400
49 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  interacts with  --  PRA1.F3; PRA8
50 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  interacts with  --  AT1G14340
51 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.9282) with  --  ABCD2
52 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.18114) with  --  PTAC6
53 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.05307) with  --  AT1G49380
54 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.845001) with  --  AT1G53120
55 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.826156) with  --  AT3G10350
56 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.934597) with  --  ATDFC; DFC; FPGS2
57 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G02060
58 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.00737) with  --  ATAB2
59 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.952702) with  --  EMB2083
60 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.941022) with  --  AT3G28460
61 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.06677) with  --  AT3G18680
62 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.90796) with  --  ATKRS-2; OVA5
63 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.09495) with  --  AT3G20930
64 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.877614) with  --  AT3G22150
65 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.871136) with  --  PTAC14
66 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.845926) with  --  AT4G24090
67 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.17426) with  --  AT4G26370
68 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.02996) with  --  NARA5
69 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.969207) with  --  AT3G43540
70 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.08704) with  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
71 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.30015) with  --  AT5G02710
72 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.832345) with  --  AT5G03900
73 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.942546) with  --  AT5G14460
74 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.917944) with  --  EMB139; EMB506
75 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.916618) with  --  scpl42
76 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.02599) with  --  EMB1006
77 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.17096) with  --  AtPLR1; PLR1
78 AT1G60230  --  has similar expression pattern (mutual information value=1.07406) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.913764) with  --  CRR21
79 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=1.09406) with  --  ATSIG6; SIG6; SIGF; SOLDAT8
80 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=1.13064) with  --  AT1G01970
81 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.97206) with  --  AT3G29185
82 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.81092) with  --  AT3G13740
83 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=1.07691) with  --  PAM68
84 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=1.06274) with  --  PGR3
85 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.838874) with  --  ATPPR5; EMB2453
86 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.931643) with  --  AT3G60370
87 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.977928) with  --  SVR7
88 AT1G60230  --  has similar expression pattern (mutual information value=0.971296) with  --  AT3G02450  --  is the target gene of  --  ath-miR2937
89 AT1G60230  --  has similar expression pattern (mutual information value=0.926189) with  --  SVR3  --  has similar expression pattern (mutual information value=0.876092) with  --  AT1G52870
90 AT1G60230  --  has similar expression pattern (mutual information value=0.926189) with  --  SVR3  --  has similar expression pattern (mutual information value=0.960342) with  --  AT4G10300
91 AT1G60230  --  has similar expression pattern (mutual information value=0.926189) with  --  SVR3  --  has similar expression pattern (mutual information value=0.923736) with  --  AT4G12830
92 AT1G60230  --  has similar expression pattern (mutual information value=0.926189) with  --  SVR3  --  interacts with  --  ATCSP3; CSP3
93 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  interacts with  --  LPA3
94 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  interacts with  --  ALB3
95 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.955461) with  --  AT1G12250
96 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.949345) with  --  MAP1B; MAP1C
97 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.96375) with  --  ATSKL1; SKL1
98 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.917545) with  --  AT3G17930
99 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=1.12876) with  --  AT3G25805
100 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.818854) with  --  emb2076
101 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.984533) with  --  AT4G37510
102 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=1.11084) with  --  AT5G38290
103 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.911948) with  --  AT5G44520
104 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=1.29764) with  --  ARRPS1; RPS1
105 AT1G60230  --  has similar expression pattern (mutual information value=1.01659) with  --  LPA2  --  has similar expression pattern (mutual information value=0.978936) with  --  SECE1
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