Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G13227
Type: Protein GRN ID: np28700 Name:
Annotation: serine-rich protein-related
Gene Locus: AT3G13227
Gene Expression (Affy ATH1 probeset):
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G13227  --  interacts with  --  AT4G39050
3 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2
4 AT3G13227  --  interacts with  --  AT4G30940
5 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  KAN; KAN1
6 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT5G37550
7 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  VPS20.2
8 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT5G58950
9 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT5G57910
10 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT5G22890
11 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT5G11090
12 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  ATPUB49; PUB49
13 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT5G63350
14 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT5G49210
15 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G55890
16 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G31870
17 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  ATCFM2; CFM2
18 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT2G35240
19 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  TTL3; VIT
20 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G71020
21 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT2G43370
22 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  CYCA2;3
23 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  CIPK9; PKS6; SnRK3.12
24 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  ATSIG6; SIG6; SIGF; SOLDAT8
25 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G48280
26 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT4G33920
27 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT2G39100
28 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G03140
29 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT3G60200
30 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT4G32590
31 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  PYM; UVI4
32 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  MOS1
33 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT2G32840
34 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT2G17670
35 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G61590
36 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  ATHM4; ATM4; TRX-M4
37 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G71970
38 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  DRIP2
39 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G49850
40 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  ATG8D
41 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT4G28230
42 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT1G53800
43 AT3G13227  --  interacts with  --  AT4G39050  --  interacts with  --  AT3G24740
44 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2  --  interacts with  --  RGA1
45 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2  --  interacts with  --  ATSIRB; SIRB
46 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2  --  interacts with  --  AT1G72030
47 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2  --  is the target gene of  --  ath-miR171c
48 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2  --  is the target gene of  --  ath-miR171b
49 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2  --  is the target gene of  --  ath-miR171a
50 AT3G13227  --  interacts with  --  ATHAM2; HAM2; LOM2  --  is the target gene of  --  ath-miR170
51 AT3G13227  --  interacts with  --  AT4G30940  --  interacts with  --  ATGSTU2; GST20; GSTU2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact