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Location:  Home > Details for node AT3G54630
Type: Protein GRN ID: np28622 Name:
Annotation: CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink).
Gene Locus: AT3G54630
Gene Expression (Affy ATH1 probeset): 251844_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G54630  --  interacts with  --  AT4G37130
3 AT3G54630  --  has similar expression pattern (mutual information value=0.905665) with  --  AT5G07810
4 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300
5 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT4G30100
6 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AtPPR2; EMB2750; PPR2
7 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT3G10250
8 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT1G49700
9 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  DHS2
10 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AtBRCC36A; BRCC36A
11 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ATPC1
12 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT2G15960
13 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ATHY2; GUN3; HY2
14 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  SHM4
15 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  KNAT3
16 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT3G05270
17 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ATPCB; ATPERX34; PERX34; PRX34; PRXCB
18 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT5G56160
19 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2
20 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ATRHM1; RHM1; ROL1
21 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  FTSH1
22 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT5G58510
23 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT4G26410
24 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT5G03500
25 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT1G21440
26 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT1G79160
27 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT3G20720
28 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  AT1G79010
29 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ATMYB75; MYB75; PAP1; SIAA1
30 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  EMB2766
31 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ACT7
32 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  ATVHA-C; DET3
33 AT3G54630  --  interacts with  --  AT4G37130  --  interacts with  --  VPS28-1
34 AT3G54630  --  has similar expression pattern (mutual information value=0.905665) with  --  AT5G07810  --  has similar expression pattern (mutual information value=0.800307) with  --  AGT; AGT1; SGAT
35 AT3G54630  --  has similar expression pattern (mutual information value=0.905665) with  --  AT5G07810  --  has similar expression pattern (mutual information value=0.956153) with  --  ATCAP-C; ATSMC3; ATSMC4; SMC3
36 AT3G54630  --  has similar expression pattern (mutual information value=0.905665) with  --  AT5G07810  --  has similar expression pattern (mutual information value=0.825545) with  --  AT5G13520
37 AT3G54630  --  has similar expression pattern (mutual information value=0.905665) with  --  AT5G07810  --  has similar expression pattern (mutual information value=1.03364) with  --  AT4G15890
38 AT3G54630  --  has similar expression pattern (mutual information value=0.905665) with  --  AT5G07810  --  has similar expression pattern (mutual information value=0.8608) with  --  KINESIN-12A; PAKRP1
39 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.817998) with  --  AT2G36200
40 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.910952) with  --  POK1
41 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.830882) with  --  DEL3; E2FF; E2L2
42 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.853017) with  --  AT3G44050
43 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.816554) with  --  AILP1; ATAILP1
44 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300  --  has similar expression pattern (mutual information value=0.884269) with  --  AT5G27330
45 AT3G54630  --  has similar expression pattern (mutual information value=0.89668) with  --  AT5G33300  --  is the target gene of  --  ath-miR1886.2
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