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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G48730
Type: Protein GRN ID: np36863 Name:
Annotation: Pentatricopeptide repeat (PPR) superfamily protein
Gene Locus: AT5G48730
Gene Expression (Affy ATH1 probeset): 248669_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650
3 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  PTAC18
4 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970
5 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550
6 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z
7 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1
8 AT5G48730  --  has similar expression pattern (mutual information value=0.899055) with  --  PAM68
9 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  interacts with  --  AT5G19960
10 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  interacts with  --  AT3G11590
11 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  interacts with  --  ATMAP70-1; MAP70-1
12 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  interacts with  --  AT1G05410
13 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  interacts with  --  ATMAP70-2; MAP70-2
14 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.860021) with  --  ATGRX2; CXIP2
15 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.923083) with  --  SKL2
16 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.926664) with  --  AT1G70200
17 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.17412) with  --  ATRAP; RAP
18 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.14023) with  --  AT1G11430
19 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.823989) with  --  ATHY2; GUN3; HY2
20 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.935596) with  --  PTAC13
21 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.00292) with  --  AT3G08740
22 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.861466) with  --  AT3G06950
23 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.830355) with  --  AT3G25470
24 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.833825) with  --  FLU
25 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.05876) with  --  AT4G24750
26 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.14921) with  --  AT4G26370
27 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.881025) with  --  ATPPR5; EMB2453
28 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.00088) with  --  AT3G59040
29 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.13661) with  --  FSD3
30 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.984507) with  --  AT5G28750
31 AT5G48730  --  has similar expression pattern (mutual information value=0.881748) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.07683) with  --  SVR7
32 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.07208) with  --  ATSIG6; SIG6; SIGF; SOLDAT8
33 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.933311) with  --  AT1G78180
34 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.979349) with  --  ATAB2
35 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.13064) with  --  AT3G02450
36 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.990288) with  --  PGR7
37 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.08068) with  --  AT3G25805
38 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.802285) with  --  PDE327
39 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.0754) with  --  PGR3
40 AT5G48730  --  has similar expression pattern (mutual information value=1.01453) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.13246) with  --  APO2; emb1629
41 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.01248) with  --  LIP2
42 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.10349) with  --  AT1G04420
43 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.04222) with  --  AT1G14030
44 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.00161) with  --  AT1G14270
45 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.16035) with  --  MAP1B; MAP1C
46 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=0.819098) with  --  AHB2; ARATH GLB2; ATGLB2; GLB2; HB2; NSHB2
47 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.00309) with  --  AT4G24090
48 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=0.95294) with  --  AT4G37510
49 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.09021) with  --  CRR7
50 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=0.862842) with  --  AT5G48220
51 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.13316) with  --  CP31B
52 AT5G48730  --  has similar expression pattern (mutual information value=1.08369) with  --  AT3G04550  --  has similar expression pattern (mutual information value=1.02898) with  --  AT5G66470
53 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  interacts with  --  MRL7
54 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  interacts with  --  FLN2
55 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  interacts with  --  FLN1
56 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=1.0442) with  --  HMR; PTAC12
57 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=0.806045) with  --  ATCAF1; CAF1
58 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=1.03635) with  --  MRL7-L
59 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=1.15808) with  --  AT1G10522
60 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=1.13578) with  --  AT1G56050
61 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=1.06908) with  --  CS26
62 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=0.921091) with  --  AT4G39040
63 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=0.838378) with  --  ARC6
64 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=1.33325) with  --  AT5G46580
65 AT5G48730  --  has similar expression pattern (mutual information value=0.834252) with  --  TRX P; TRX z  --  has similar expression pattern (mutual information value=0.814953) with  --  PTAC15
66 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.3761) with  --  AT2G17972
67 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.1333) with  --  AT1G05140
68 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=0.877617) with  --  AT1G06840
69 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=0.932398) with  --  ABCI12
70 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.06273) with  --  CP33; PDE322
71 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.10493) with  --  AT4G11175
72 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.03103) with  --  AT5G11450
73 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.13055) with  --  AtCEST; CEST; Y3IP1
74 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.04018) with  --  AT5G62840
75 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.00671) with  --  MAP1D
76 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.05399) with  --  AT2G33180
77 AT5G48730  --  has similar expression pattern (mutual information value=1.1653) with  --  PLSP1  --  transport  --  Lipid
78 AT5G48730  --  has similar expression pattern (mutual information value=0.899055) with  --  PAM68  --  has similar expression pattern (mutual information value=0.890128) with  --  AT3G10350
79 AT5G48730  --  has similar expression pattern (mutual information value=0.899055) with  --  PAM68  --  has similar expression pattern (mutual information value=0.942522) with  --  AT4G38020
80 AT5G48730  --  has similar expression pattern (mutual information value=0.899055) with  --  PAM68  --  has similar expression pattern (mutual information value=1.08218) with  --  AT5G02710
81 AT5G48730  --  has similar expression pattern (mutual information value=0.899055) with  --  PAM68  --  has similar expression pattern (mutual information value=1.07489) with  --  AT5G38290
82 AT5G48730  --  has similar expression pattern (mutual information value=0.899055) with  --  PAM68  --  has similar expression pattern (mutual information value=1.14163) with  --  AtPLR1; PLR1
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