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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G06950
Type: Protein GRN ID: np25063 Name:
Annotation: Pseudouridine synthase family protein [EC:5.4.99.12]
Gene Locus: AT3G06950
Gene Expression (Affy ATH1 probeset): 258538_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650
3 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  PTAC18
4 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13
5 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1
6 AT3G06950  --  has similar expression pattern (mutual information value=0.978865) with  --  PGR7
7 AT3G06950  --  has similar expression pattern (mutual information value=0.84553) with  --  AT3G25470
8 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185
9 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370
10 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  interacts with  --  AT5G19960
11 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  interacts with  --  AT3G11590
12 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  interacts with  --  ATMAP70-1; MAP70-1
13 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  interacts with  --  AT1G05410
14 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  interacts with  --  ATMAP70-2; MAP70-2
15 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.860021) with  --  ATGRX2; CXIP2
16 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.923083) with  --  SKL2
17 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.926664) with  --  AT1G70200
18 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.17412) with  --  ATRAP; RAP
19 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.14023) with  --  AT1G11430
20 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.823989) with  --  ATHY2; GUN3; HY2
21 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.00292) with  --  AT3G08740
22 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.01281) with  --  TRX P; TRX z
23 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.833825) with  --  FLU
24 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.05876) with  --  AT4G24750
25 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.14921) with  --  AT4G26370
26 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.881025) with  --  ATPPR5; EMB2453
27 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.00088) with  --  AT3G59040
28 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.13661) with  --  FSD3
29 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.881748) with  --  AT5G48730
30 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.984507) with  --  AT5G28750
31 AT3G06950  --  has similar expression pattern (mutual information value=0.861466) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.07683) with  --  SVR7
32 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.2961) with  --  AT2G24060
33 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.03289) with  --  AT2G17972
34 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.23782) with  --  AT1G62780
35 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.848992) with  --  AT1G63610
36 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.18036) with  --  AT1G12800
37 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.999253) with  --  AT3G04550
38 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.898758) with  --  emb2768
39 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.911737) with  --  AT3G20930
40 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.32314) with  --  CP33; PDE322
41 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.1841) with  --  AT4G11175
42 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.953654) with  --  AT4G20960
43 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.970569) with  --  AT4G39040
44 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.819971) with  --  FTSZ2-2
45 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.02961) with  --  CP31B
46 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=0.983279) with  --  APO2; emb1629
47 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.15808) with  --  AT5G66470
48 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.17867) with  --  PSRP5
49 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.18703) with  --  MAP1D
50 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.3621) with  --  AT5G28500
51 AT3G06950  --  has similar expression pattern (mutual information value=0.994806) with  --  PTAC13  --  has similar expression pattern (mutual information value=1.10573) with  --  NTRC
52 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.1333) with  --  AT1G05140
53 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.00963) with  --  AT1G04420
54 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=0.827283) with  --  MRL7-L
55 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.00014) with  --  AT1G01970
56 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.01504) with  --  AT1G14270
57 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=0.877617) with  --  AT1G06840
58 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=0.932398) with  --  ABCI12
59 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.09393) with  --  AT3G25805
60 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.03103) with  --  AT5G11450
61 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.13055) with  --  AtCEST; CEST; Y3IP1
62 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=0.895873) with  --  AT5G48220
63 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.04018) with  --  AT5G62840
64 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  has similar expression pattern (mutual information value=1.05399) with  --  AT2G33180
65 AT3G06950  --  has similar expression pattern (mutual information value=0.903167) with  --  PLSP1  --  transport  --  Lipid
66 AT3G06950  --  has similar expression pattern (mutual information value=0.978865) with  --  PGR7  --  has similar expression pattern (mutual information value=1.10732) with  --  EMB3105
67 AT3G06950  --  has similar expression pattern (mutual information value=0.978865) with  --  PGR7  --  has similar expression pattern (mutual information value=0.876806) with  --  ABCI14; TGD1
68 AT3G06950  --  has similar expression pattern (mutual information value=0.978865) with  --  PGR7  --  has similar expression pattern (mutual information value=1.10886) with  --  RPL15
69 AT3G06950  --  has similar expression pattern (mutual information value=0.978865) with  --  PGR7  --  has similar expression pattern (mutual information value=0.90588) with  --  EMB2369
70 AT3G06950  --  has similar expression pattern (mutual information value=0.978865) with  --  PGR7  --  has similar expression pattern (mutual information value=1.10934) with  --  RPL9
71 AT3G06950  --  has similar expression pattern (mutual information value=0.978865) with  --  PGR7  --  interacts with  --  AtHEMA1; HEMA1
72 AT3G06950  --  has similar expression pattern (mutual information value=0.84553) with  --  AT3G25470  --  has similar expression pattern (mutual information value=0.813312) with  --  AT3G52960
73 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.18277) with  --  AT1G14030
74 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.09487) with  --  FUG1
75 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.26858) with  --  AT1G49380
76 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.18788) with  --  LPA3
77 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.19987) with  --  AT1G49975
78 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.23768) with  --  AT1G01080
79 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.22756) with  --  emb2184
80 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.07356) with  --  NDF5
81 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=0.841802) with  --  ATCFM2; CFM2
82 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.06059) with  --  AT3G04760
83 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.07363) with  --  AT3G09580
84 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.20937) with  --  ATAB2
85 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=0.97206) with  --  AT3G02450
86 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=0.904007) with  --  ADS3; FAD5; FADB; JB67
87 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.06569) with  --  AT3G23700
88 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.03022) with  --  PTAC14
89 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.22968) with  --  ATRBP31; ATRBP33; CP31; RBP31
90 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.18145) with  --  NARA5
91 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.16465) with  --  FAD6; FADC; SFD4
92 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.16203) with  --  PGR3
93 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.13179) with  --  pde191
94 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.09919) with  --  AT4G39970
95 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.13902) with  --  AT3G43540
96 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.0419) with  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
97 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.1415) with  --  APG3
98 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.06853) with  --  AT5G08650
99 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=0.917774) with  --  ATPRFB; HCF109
100 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.05523) with  --  AT5G46420
101 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.06688) with  --  LPA2
102 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.11364) with  --  crr1
103 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.1176) with  --  DXR; PDE129
104 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.3305) with  --  AT5G14910
105 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.01991) with  --  AT1G26230
106 AT3G06950  --  has similar expression pattern (mutual information value=1.01423) with  --  AT3G29185  --  has similar expression pattern (mutual information value=1.07463) with  --  SECE1
107 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=0.967144) with  --  CRR6
108 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=0.96903) with  --  AT2G17033
109 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=0.928287) with  --  PDE318
110 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=0.868273) with  --  AT1G50450
111 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=0.954542) with  --  MAP1B; MAP1C
112 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=0.969794) with  --  ATSKL1; SKL1
113 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=0.939446) with  --  AT5G02710
114 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  has similar expression pattern (mutual information value=1.07045) with  --  AT5G52960
115 AT3G06950  --  has similar expression pattern (mutual information value=1.11941) with  --  AT3G60370  --  interacts with  --  AT4G35760
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