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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ath-miR396a
Type: non-coding-miRNA GRN ID: nn02464 Name: ath-miR396a
Annotation: MIR396A | MIR396A; miRNA
Gene Locus: AT2G10606
miRBase: Link
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR396a  --  inhibit the expression of  --  AT5G58980
3 ath-miR396a  --  inhibit the expression of  --  BIO1
4 ath-miR396a  --  inhibit the expression of  --  AT5G43060
5 ath-miR396a  --  inhibit the expression of  --  ACI1
6 ath-miR396a  --  inhibit the expression of  --  AT4G12050
7 ath-miR396a  --  inhibit the expression of  --  AtGRF4; GRF4
8 ath-miR396a  --  inhibit the expression of  --  FLU
9 ath-miR396a  --  inhibit the expression of  --  AtGRF3; GRF3
10 ath-miR396a  --  inhibit the expression of  --  AT2G34530
11 ath-miR396a  --  inhibit the expression of  --  AT2G15630
12 ath-miR396a  --  inhibit the expression of  --  AT1G35370
13 ath-miR396a  --  inhibit the expression of  --  AT5G58980  --  has product (in catalytic reaction)  --  Sphingosine
14 ath-miR396a  --  inhibit the expression of  --  AT5G58980  --  has product (in catalytic reaction)  --  Carboxylate
15 ath-miR396a  --  inhibit the expression of  --  AT5G58980  --  is the target gene of  --  ath-miR396b
16 ath-miR396a  --  inhibit the expression of  --  BIO1  --  has product (in catalytic reaction)  --  7,8-Diaminononanoate
17 ath-miR396a  --  inhibit the expression of  --  BIO1  --  has product (in catalytic reaction)  --  S-Adenosyl-4-methylthio-2-oxobutanoate
18 ath-miR396a  --  inhibit the expression of  --  AT5G43060  --  has similar expression pattern (mutual information value=0.862297) with  --  AT1G53180
19 ath-miR396a  --  inhibit the expression of  --  AT5G43060  --  has similar expression pattern (mutual information value=0.951275) with  --  ATWRKY36; WRKY36
20 ath-miR396a  --  inhibit the expression of  --  AT5G43060  --  interacts with  --  ATPDI5; ATPDIL1-1; PDI5; PDIL1-1
21 ath-miR396a  --  inhibit the expression of  --  ACI1  --  interacts with  --  ALC
22 ath-miR396a  --  inhibit the expression of  --  AtGRF4; GRF4  --  interacts with  --  GIF3
23 ath-miR396a  --  inhibit the expression of  --  AtGRF4; GRF4  --  interacts with  --  GIF2
24 ath-miR396a  --  inhibit the expression of  --  AtGRF4; GRF4  --  interacts with  --  AN3; ATGIF1; GIF; GIF1
25 ath-miR396a  --  inhibit the expression of  --  FLU  --  interacts with  --  AtHEMA1; HEMA1
26 ath-miR396a  --  inhibit the expression of  --  FLU  --  has similar expression pattern (mutual information value=0.833825) with  --  AT2G32650
27 ath-miR396a  --  inhibit the expression of  --  FLU  --  has similar expression pattern (mutual information value=0.833825) with  --  PTAC18
28 ath-miR396a  --  inhibit the expression of  --  FLU  --  has similar expression pattern (mutual information value=0.841806) with  --  ATRBP31; ATRBP33; CP31; RBP31
29 ath-miR396a  --  inhibit the expression of  --  FLU  --  has similar expression pattern (mutual information value=0.990232) with  --  pde191
30 ath-miR396a  --  inhibit the expression of  --  FLU  --  has similar expression pattern (mutual information value=0.832474) with  --  AT3G59040
31 ath-miR396a  --  inhibit the expression of  --  AtGRF3; GRF3  --  is the target gene of  --  ath-miR855
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