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Location:  Home > Details for node ath-miR397b
Type: non-coding-miRNA GRN ID: nn04793 Name: ath-miR397b
Annotation: MIR397B | MIR397B; miRNA
Gene Locus: AT4G13555
miRBase: Link
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17
3 ath-miR397b  --  inhibit the expression of  --  DPA
4 ath-miR397b  --  inhibit the expression of  --  ATG2484-1; G2484-1
5 ath-miR397b  --  inhibit the expression of  --  CKB3
6 ath-miR397b  --  inhibit the expression of  --  ATLMCO4; IRX12; LAC4; LMCO4
7 ath-miR397b  --  inhibit the expression of  --  ATLAC2; LAC2
8 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  has similar expression pattern (mutual information value=1.1899) with  --  AtDMP2; DMP2
9 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  has similar expression pattern (mutual information value=0.892699) with  --  ATCESA8; CESA8; IRX1; LEW2
10 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  has similar expression pattern (mutual information value=0.92325) with  --  APX5
11 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  has similar expression pattern (mutual information value=1.19522) with  --  LAC11
12 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  has similar expression pattern (mutual information value=0.958258) with  --  ATFLA11; FLA11
13 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  has similar expression pattern (mutual information value=0.953441) with  --  AT5G40020
14 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  has similar expression pattern (mutual information value=1.15958) with  --  AT1G58070
15 ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17  --  is the target gene of  --  ath-miR397a
16 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  ATE2F2; ATE2FC; E2FC
17 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  ATE2FB; E2F1; E2FB
18 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  ETG1
19 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  CAK1AT; CDKF;1
20 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  ATE2FA; E2F3
21 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  AT1G06510
22 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  CYCD3;2
23 ath-miR397b  --  inhibit the expression of  --  DPA  --  interacts with  --  ATCYCD1;1; CYCD1;1
24 ath-miR397b  --  inhibit the expression of  --  ATG2484-1; G2484-1  --  has similar expression pattern (mutual information value=0.869461) with  --  AT2G17930
25 ath-miR397b  --  inhibit the expression of  --  ATG2484-1; G2484-1  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
26 ath-miR397b  --  inhibit the expression of  --  CKB3  --  interacts with  --  AtCCA1; CCA1
27 ath-miR397b  --  inhibit the expression of  --  CKB3  --  interacts with  --  LHY; LHY1
28 ath-miR397b  --  inhibit the expression of  --  CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5
29 ath-miR397b  --  inhibit the expression of  --  CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2
30 ath-miR397b  --  inhibit the expression of  --  CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840
31 ath-miR397b  --  inhibit the expression of  --  ATLMCO4; IRX12; LAC4; LMCO4  --  has similar expression pattern (mutual information value=0.915242) with  --  XCP2
32 ath-miR397b  --  inhibit the expression of  --  ATLMCO4; IRX12; LAC4; LMCO4  --  has similar expression pattern (mutual information value=0.835199) with  --  AT1G72230
33 ath-miR397b  --  inhibit the expression of  --  ATLMCO4; IRX12; LAC4; LMCO4  --  has similar expression pattern (mutual information value=0.841228) with  --  ATCTL2; CTL2
34 ath-miR397b  --  inhibit the expression of  --  ATLAC2; LAC2  --  transport  --  Heme
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