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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G28870
Type: Protein GRN ID: np32792 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49680.1); Has 22985 Blast hits to 1198 proteins in 188 species: Archae - 0; Bacteria - 21210; Metazoa - 895; Fungi - 112; Plants - 141; Viruses - 114; Other Eukaryotes - 513 (source: NCBI BLink).
Gene Locus: AT4G28870
Gene Expression (Affy ATH1 probeset): 261600_x_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490
3 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.850128) with  --  AT2G10780
4 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G04970
5 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT1G32830
6 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT5G34895
7 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT3G30450
8 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G15200
9 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G02200
10 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.836606) with  --  AT2G06440
11 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.884793) with  --  AT1G49680
12 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.850681) with  --  SDE3
13 AT4G28870  --  has similar expression pattern (mutual information value=0.884793) with  --  AT2G06490  --  has similar expression pattern (mutual information value=0.978434) with  --  AT3G43530
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