Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node YCF5
Type: Protein GRN ID: np43356 Name: YCF5
Annotation: YCF5 | Cytochrome C assembly protein [TCDB:8.A.30.1]
Gene Locus: ATCG01040
Gene Expression (Affy ATH1 probeset): 244961_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 YCF5  --  has similar expression pattern (mutual information value=1.12052) with  --  MATK
3 YCF5  --  has similar expression pattern (mutual information value=1.2733) with  --  PSAI
4 YCF5  --  has similar expression pattern (mutual information value=1.34934) with  --  NDHJ
5 YCF5  --  has similar expression pattern (mutual information value=1.23772) with  --  PSAB
6 YCF5  --  has similar expression pattern (mutual information value=1.23348) with  --  RPS7.2
7 YCF5  --  has similar expression pattern (mutual information value=1.23348) with  --  RPS7; RPS7.1
8 YCF5  --  has similar expression pattern (mutual information value=1.29877) with  --  PSBH
9 YCF5  --  has similar expression pattern (mutual information value=1.34431) with  --  PSBT; PSBTC
10 YCF5  --  has similar expression pattern (mutual information value=1.14337) with  --  PSAJ
11 YCF5  --  has similar expression pattern (mutual information value=1.26253) with  --  ORF31
12 YCF5  --  has similar expression pattern (mutual information value=1.35429) with  --  NDHD
13 YCF5  --  has similar expression pattern (mutual information value=1.12052) with  --  MATK  --  has similar expression pattern (mutual information value=1.11778) with  --  YCF1.2
14 YCF5  --  has similar expression pattern (mutual information value=1.12052) with  --  MATK  --  has similar expression pattern (mutual information value=1.11778) with  --  YCF1.1
15 YCF5  --  has similar expression pattern (mutual information value=1.12052) with  --  MATK  --  has similar expression pattern (mutual information value=1.18355) with  --  RPS19
16 YCF5  --  has similar expression pattern (mutual information value=1.12052) with  --  MATK  --  has similar expression pattern (mutual information value=1.23241) with  --  CLPP1; PCLPP
17 YCF5  --  has similar expression pattern (mutual information value=1.12052) with  --  MATK  --  has similar expression pattern (mutual information value=1.0266) with  --  RPL32
18 YCF5  --  has similar expression pattern (mutual information value=1.2733) with  --  PSAI  --  has similar expression pattern (mutual information value=0.815814) with  --  PSBA
19 YCF5  --  has similar expression pattern (mutual information value=1.2733) with  --  PSAI  --  has similar expression pattern (mutual information value=1.36617) with  --  YCF10
20 YCF5  --  has similar expression pattern (mutual information value=1.2733) with  --  PSAI  --  has similar expression pattern (mutual information value=1.38053) with  --  YCF4
21 YCF5  --  has similar expression pattern (mutual information value=1.2733) with  --  PSAI  --  has similar expression pattern (mutual information value=1.35989) with  --  PSBG
22 YCF5  --  has similar expression pattern (mutual information value=1.2733) with  --  PSAI  --  has similar expression pattern (mutual information value=1.18022) with  --  PSBC
23 YCF5  --  has similar expression pattern (mutual information value=1.2733) with  --  PSAI  --  has similar expression pattern (mutual information value=0.952534) with  --  PSAC
24 YCF5  --  has similar expression pattern (mutual information value=1.34934) with  --  NDHJ  --  has similar expression pattern (mutual information value=1.5252) with  --  YCF9
25 YCF5  --  has similar expression pattern (mutual information value=1.34934) with  --  NDHJ  --  has similar expression pattern (mutual information value=1.13653) with  --  NDHA
26 YCF5  --  has similar expression pattern (mutual information value=1.23772) with  --  PSAB  --  has similar expression pattern (mutual information value=0.876989) with  --  ATPB; PB
27 YCF5  --  has similar expression pattern (mutual information value=1.23772) with  --  PSAB  --  has similar expression pattern (mutual information value=0.85341) with  --  ATPE
28 YCF5  --  has similar expression pattern (mutual information value=1.23772) with  --  PSAB  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAA
29 YCF5  --  has similar expression pattern (mutual information value=1.23348) with  --  RPS7.2  --  has similar expression pattern (mutual information value=0.922066) with  --  RPL16
30 YCF5  --  has similar expression pattern (mutual information value=1.29877) with  --  PSBH  --  has similar expression pattern (mutual information value=1.08097) with  --  ATPA
31 YCF5  --  has similar expression pattern (mutual information value=1.29877) with  --  PSBH  --  has similar expression pattern (mutual information value=1.00182) with  --  RPL23.2
32 YCF5  --  has similar expression pattern (mutual information value=1.29877) with  --  PSBH  --  has similar expression pattern (mutual information value=1.00182) with  --  RPL23; RPL23.1
33 YCF5  --  has similar expression pattern (mutual information value=1.29877) with  --  PSBH  --  has similar expression pattern (mutual information value=1.37766) with  --  PETB
34 YCF5  --  has similar expression pattern (mutual information value=1.29877) with  --  PSBH  --  is modified by  --  STN8
35 YCF5  --  has similar expression pattern (mutual information value=1.29877) with  --  PSBH  --  is modified by  --  STN7
36 YCF5  --  has similar expression pattern (mutual information value=1.34431) with  --  PSBT; PSBTC  --  has similar expression pattern (mutual information value=0.894726) with  --  PSBI
37 YCF5  --  has similar expression pattern (mutual information value=1.34431) with  --  PSBT; PSBTC  --  has similar expression pattern (mutual information value=1.00251) with  --  PSBL
38 YCF5  --  has similar expression pattern (mutual information value=1.14337) with  --  PSAJ  --  has similar expression pattern (mutual information value=0.957566) with  --  PSBM
39 YCF5  --  has similar expression pattern (mutual information value=1.14337) with  --  PSAJ  --  has similar expression pattern (mutual information value=1.18801) with  --  NDHI
40 YCF5  --  has similar expression pattern (mutual information value=1.26253) with  --  ORF31  --  has similar expression pattern (mutual information value=0.852178) with  --  AT1G61150
41 YCF5  --  has similar expression pattern (mutual information value=1.26253) with  --  ORF31  --  has similar expression pattern (mutual information value=1.31532) with  --  PETA
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact