Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node YCF10
Type: Protein GRN ID: np43419 Name: YCF10
Annotation: YCF10 | CemA-like proton extrusion protein-related [TCDB:8.A.30.1] [TCDB:9.A.48.1]
Gene Locus: ATCG00530
Gene Expression (Affy ATH1 probeset): 245019_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 YCF10  --  has similar expression pattern (mutual information value=1.87167) with  --  PETA
3 YCF10  --  has similar expression pattern (mutual information value=2.05652) with  --  YCF4
4 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI
5 YCF10  --  has similar expression pattern (mutual information value=1.3902) with  --  RPS7.2
6 YCF10  --  has similar expression pattern (mutual information value=1.3902) with  --  RPS7; RPS7.1
7 YCF10  --  has similar expression pattern (mutual information value=0.815722) with  --  RPS8
8 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH
9 YCF10  --  has similar expression pattern (mutual information value=1.35098) with  --  ORF31
10 YCF10  --  has similar expression pattern (mutual information value=1.22189) with  --  NDHD
11 YCF10  --  has similar expression pattern (mutual information value=1.42491) with  --  NDHA
12 YCF10  --  has similar expression pattern (mutual information value=1.87167) with  --  PETA  --  has similar expression pattern (mutual information value=1.05872) with  --  RPL32
13 YCF10  --  has similar expression pattern (mutual information value=1.87167) with  --  PETA  --  has similar expression pattern (mutual information value=1.23758) with  --  NDHI
14 YCF10  --  has similar expression pattern (mutual information value=2.05652) with  --  YCF4  --  has similar expression pattern (mutual information value=1.24858) with  --  PSAA
15 YCF10  --  has similar expression pattern (mutual information value=2.05652) with  --  YCF4  --  has similar expression pattern (mutual information value=1.25327) with  --  PSAB
16 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI  --  has similar expression pattern (mutual information value=1.11483) with  --  MATK
17 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI  --  has similar expression pattern (mutual information value=0.815814) with  --  PSBA
18 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI  --  has similar expression pattern (mutual information value=1.35989) with  --  PSBG
19 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI  --  has similar expression pattern (mutual information value=1.31104) with  --  NDHJ
20 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI  --  has similar expression pattern (mutual information value=1.18022) with  --  PSBC
21 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI  --  has similar expression pattern (mutual information value=1.2733) with  --  YCF5
22 YCF10  --  has similar expression pattern (mutual information value=1.36617) with  --  PSAI  --  has similar expression pattern (mutual information value=0.952534) with  --  PSAC
23 YCF10  --  has similar expression pattern (mutual information value=1.3902) with  --  RPS7.2  --  has similar expression pattern (mutual information value=1.25284) with  --  YCF9
24 YCF10  --  has similar expression pattern (mutual information value=1.3902) with  --  RPS7.2  --  has similar expression pattern (mutual information value=0.922066) with  --  RPL16
25 YCF10  --  has similar expression pattern (mutual information value=1.3902) with  --  RPS7.2  --  has similar expression pattern (mutual information value=1.23156) with  --  CLPP1; PCLPP
26 YCF10  --  has similar expression pattern (mutual information value=0.815722) with  --  RPS8  --  has similar expression pattern (mutual information value=0.876914) with  --  RPL22
27 YCF10  --  has similar expression pattern (mutual information value=0.815722) with  --  RPS8  --  has similar expression pattern (mutual information value=0.850479) with  --  RPL14
28 YCF10  --  has similar expression pattern (mutual information value=0.815722) with  --  RPS8  --  has similar expression pattern (mutual information value=1.21872) with  --  RPL36
29 YCF10  --  has similar expression pattern (mutual information value=0.815722) with  --  RPS8  --  has similar expression pattern (mutual information value=1.20775) with  --  RPS11
30 YCF10  --  has similar expression pattern (mutual information value=0.815722) with  --  RPS8  --  has similar expression pattern (mutual information value=1.09763) with  --  NDHH
31 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH  --  has similar expression pattern (mutual information value=1.08097) with  --  ATPA
32 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH  --  has similar expression pattern (mutual information value=1.00182) with  --  RPL23.2
33 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH  --  has similar expression pattern (mutual information value=1.00182) with  --  RPL23; RPL23.1
34 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH  --  has similar expression pattern (mutual information value=1.37766) with  --  PETB
35 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH  --  has similar expression pattern (mutual information value=1.25788) with  --  PSBT; PSBTC
36 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH  --  is modified by  --  STN8
37 YCF10  --  has similar expression pattern (mutual information value=1.42584) with  --  PSBH  --  is modified by  --  STN7
38 YCF10  --  has similar expression pattern (mutual information value=1.35098) with  --  ORF31  --  has similar expression pattern (mutual information value=0.852178) with  --  AT1G61150
39 YCF10  --  has similar expression pattern (mutual information value=1.35098) with  --  ORF31  --  has similar expression pattern (mutual information value=1.02252) with  --  PSBL
40 YCF10  --  has similar expression pattern (mutual information value=1.35098) with  --  ORF31  --  has similar expression pattern (mutual information value=1.14786) with  --  PSAJ
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact